feat: add pre-commit and ruff rulesets

.pre-commit-config.yaml

@@ -20,6 +20,12 @@ repos:
   - id: no-commit-to-branch # Prevent committing to main / master
   - id: check-added-large-files # Check for large files added to git
   - id: check-merge-conflict # Check for files that contain merge conflict
+-   repo: https://github.com/pre-commit/pygrep-hooks
+    rev: v1.10.0  # Use the ref you want to point at
+    hooks:
+    -   id: python-use-type-annotations # Check for missing type annotations
+    -   id: python-check-blanket-noqa # Check for # noqa: all
+    -   id: python-no-log-warn # Check for log.warn
 - repo: https://github.com/psf/black-pre-commit-mirror
   rev: 24.4.2
   hooks:
@@ -59,12 +65,19 @@ repos:
   hooks:
   - id: docconvert
     args: ["numpy"]
-- repo: https://github.com/b8raoult/optional-dependencies-all
-  rev: "0.0.6"
-  hooks:
-  - id: optional-dependencies-all
-    args: ["--inplace", "--exclude-keys=dev,docs,tests", "--group=dev=all,docs,tests"]
 - repo: https://github.com/tox-dev/pyproject-fmt
   rev: "2.1.3"
   hooks:
   - id: pyproject-fmt
+-   repo: https://github.com/jshwi/docsig # Check docstrings against function sig
+    rev: v0.44.2
+    hooks:
+    -   id: docsig
+        args:
+        - --ignore-no-params # Allow docstrings without parameters
+        - --check-dunders    # Check dunder methods
+        - --check-overridden # Check overridden methods
+        - --check-protected  # Check protected methods
+        - --check-class      # Check class docstrings
+        - --disable=E113     # Disable empty docstrings
+        - --summary          # Print a summary

pyproject.toml

@@ -49,6 +49,7 @@ classifiers = [
 dynamic = [
   "version",
 ]
+
 dependencies = [
   "anemoi-datasets[data]>=0.4",
   "anemoi-models",
@@ -74,35 +75,32 @@ optional-dependencies.all = [
 ]
 
 optional-dependencies.dev = [
-  "nbsphinx",
-  "pandoc",
-  "pytest",
-  "pytest-mock",
-  "sphinx",
-  "sphinx-argparse",
-  "sphinx-rtd-theme",
+  "anemoi-training[tests]",
 ]
-
 optional-dependencies.docs = [
   "nbsphinx",
   "pandoc",
   "sphinx",
   "sphinx-argparse",
   "sphinx-rtd-theme",
 ]
-
 optional-dependencies.tests = [
   "pytest",
   "pytest-mock",
 ]
 
+urls.Changelog = "https://github.com/ecmwf/anemoi-training/CHANGELOG.md"
 urls.Documentation = "https://anemoi-training.readthedocs.io/"
 urls.Homepage = "https://github.com/ecmwf/anemoi-training/"
 urls.Issues = "https://github.com/ecmwf/anemoi-training/issues"
 urls.Repository = "https://github.com/ecmwf/anemoi-training/"
-# Changelog = "https://github.com/ecmwf/anemoi-training/CHANGELOG.md"
 # Add subcommand in the `commands` directory
 scripts.anemoi-training = "anemoi.training.__main__:main"
 
 [tool.setuptools_scm]
 version_file = "src/anemoi/training/_version.py"
+
+[tool.ruff]
+select = [
+  "ALL",
+]