support dependency generation

.github/workflows/build-wheel-linux.yml

@@ -19,69 +19,29 @@ on:
   # TODO automation trigger
 
 jobs:
-
   build:
-
-    runs-on: [self-hosted, Linux, platform-builder-Rocky-8.6]
-    # TODO which manylinux do we want to build for? 2014? 2_28? 2_34? Matrix?
-    container: eccr.ecmwf.int/wheelmaker/2_28:latest
-
     name: Build manylinux_2_28
-
-    steps:
-      - uses: actions/checkout@v2
-      - run: /buildscripts/compile.sh ./eckit/python_wrapper/buildconfig
-
-      ################################################################
-      - run: /buildscripts/wheel-linux.sh ./eckit/python_wrapper/buildconfig 3.11
-      - uses: actions/upload-artifact@v4
-        name: Upload wheel 3.11
-        with:
-          name: wheel-manylinux2_28-3.11
-          path: /build/wheel/*.whl
-
-      # TODO other python versions, once the above is correct.
-      # NOTE if Matrix, then break into (compile) && (wheel & upload)@[matix] steps
-
-  test:
-
-    needs: build
-    strategy:
-      fail-fast: false
-      matrix:
-        python-version: ["3.11"] # ["3.8", "3.9", "3.10", "3.11", "3.12"] # TODO enable
-
-    name: Test with ${{ matrix.python-version }}
     runs-on: [self-hosted, Linux, platform-builder-Rocky-8.6]
-    container: eccr.ecmwf.int/wheelmaker/2_28:latest
-    steps:
-      - uses: actions/checkout@v2
-      - uses: actions/download-artifact@v4
-        with:
-          name: wheel-manylinux2_28-${{ matrix.python-version }}
-      - run: /buildscripts/test-wheel.sh ${{ matrix.python-version }}
-
-  deploy:
-
-    if: ${{ github.ref_type == 'tag' || github.event_name == 'release' }}
-    needs: [test, build]
-    strategy:
-      fail-fast: false
-      matrix:
-        python-version: ["3.11"] # ["3.8", "3.9", "3.10", "3.11", "3.12"] # TODO enable
-
-    name: Deploy wheel ${{ matrix.python-version }}
-    runs-on: [self-hosted, Linux, platform-builder-Rocky-8.6]
-    container: eccr.ecmwf.int/wheelmaker/2_28:latest
+    # TODO which manylinux do we want to build for? 2014? 2_28? 2_34? Matrix?
+    container:
+      image: eccr.ecmwf.int/wheelmaker/2_28:0.9
+      credentials:
+        username: ${{ secrets.ECMWF_DOCKER_REGISTRY_USERNAME }}
+        password: ${{ secrets.ECMWF_DOCKER_REGISTRY_ACCESS_TOKEN }}
     steps:
-      - run: mkdir artifact-${{ matrix.python-version }}
-      - uses: actions/checkout@v2
-      - uses: actions/download-artifact@v4
-        with:
-          name: wheel-manylinux2_28-${{ matrix.python-version }}
-          path: artifact-${{ matrix.python-version }}
-      - run: |
-      		/buildsripts/upload-twine.sh ${{ matrix.python-version }}
+        # TODO convert this to be matrix-friendly. Note it's a bit tricky since
+        # we'd ideally not reexecute the compile step multiple times, but it
+        # (non-essentially) depends on a matrix-based step
+      # - uses: actions/checkout@v4
+      - run: rm -rf /src && git clone --depth=1 --branch="$GITHUB_BRANCH" https://github.com/$GITHUB_REPOSITORY /src
+      - run: /buildscripts/prepare_deps.sh ./python_wrapper/buildconfig 3.11
+      - run: cd /src && /buildscripts/compile.sh ./python_wrapper/buildconfig
+      - run: cd /src && /buildscripts/wheel-linux.sh ./python_wrapper/buildconfig 3.11
+      - run: /buildscripts/test-wheel.sh ./python_wrapper/buildconfig 3.11 /build/wheel/*whl
+      - run: /buildscripts/upload-pypi.sh /build/wheel/*whl
         env:
           TWINE_USERNAME: __token__
           TWINE_PASSWORD: ${{ secrets.PYPI_API_TOKEN }}
+        # TODO because of checkout action output failing to be cleaned up later, we need to remove
+        # Either fix the checkout action, or the cleanup step, or checkout manually
+      # - run: rm -rf ./* ./.git ./.github

README.md

@@ -35,8 +35,8 @@ It features facilities to easily handle, in a cross-platform way:
 * MPI object-oriented wrapper
 * linear algebra abstraction with multiple backends (BLAS, MKL, Armadillo, Eigen3)
 * advanced container classes
-    * space partition trees
-    * file-mapped arrays
+* space partition trees
+* file-mapped arrays
 
 
 Requirements

python_wrapper/buildconfig

@@ -11,6 +11,6 @@
 # TODO we duplicate information -- pyproject.toml's `name` and `packages` are derivable from $NAME and must stay consistent
 
 NAME="eckit"
-CMAKE_PARAMS="-DENABLE_MPI=0  -DENABLE_ECKIT_GEO=1"
+CMAKE_PARAMS="-DENABLE_MPI=0  -DENABLE_ECKIT_GEO=1 -DENABLE_BUILD_TOOLS=OFF"
 PYPROJECT_DIR="python_wrapper"
-FINDLIBS_DEPENDENCIES='[]'
+DEPENDENCIES='[]'

python_wrapper/setup.cfg

@@ -1,4 +1,5 @@
 [metadata]
 description = "eckit"
 long_description = file: README.md
+long_description_content_type = text/markdown
 author = file: AUTHORS