rSalvador: An R Tool for the Luria-Delbruck Fluctuation Assay
📣 For those who prefer the convenience of a web tool, webSalvador is a new app powered by rSalvador: https://websalvador.eeeeeric.com/
- Download and install R 3.6.1 or later.
- Install Rtools 3.5 by downloading and executing the file Rtools35.exe.
- Launch R.
- Install the R package devtools by executing the following command from within R.
install.packages('devtools')
- Execute the following devtools command from within R.
devtools::install_github("eeeeeric/rSalvador", subdir = "rsalvador")
R CMD INSTALL <package>
where <package>
is the appropriate download from
the release page.
These releases are built using GitHub Actions.
R CMD check rsalvador
R CMD INSTALL rsalvador
Some frequently used rSalvador functions are also available in pySalvador for Python users (source, Jupyter manual).
Download and install R, rtools, Strawberry Perl, and MiKTeX. Strawberry Perl, MiKTeX, and rtools will automatically add themselves to the PATH, but you will need to add R manually. Note that MiKTeX is only necessary if you wish to build documentation,
Open a R prompt, and install the hypergeo and gdata packages.
install.packages('hypergeo')
install.packages('gdata')
Now you are ready to build (see below).
This will check the source files (requires LaTeX), okay to skip
R CMD check rsalvador
This will produce the archive
R CMD INSTALL --build rsalvador
Qi Zheng