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fix(ci): unbound $PYTHIA8 and deprecate valgrind checks #1043

fix(ci): unbound $PYTHIA8 and deprecate valgrind checks

fix(ci): unbound $PYTHIA8 and deprecate valgrind checks #1043

Workflow file for this run

# SPDX-License-Identifier: LGPL-3.0-or-later
# Copyright (C) 2023 Christopher Dilks
name: ci
on:
pull_request:
push:
branches:
- main
defaults:
run:
shell: bash
env:
ebeam_en: 18
pbeam_en: 275
root: root -b -q
root_no_delphes: root -b -q macro/ci/define_exclude_delphes.C
concurrency:
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }}
cancel-in-progress: true
jobs:
# BUILD ---------------------------------------------------------------------------
build_all:
runs-on: ubuntu-latest
strategy:
fail-fast: true
matrix:
recipe:
- release
# - debug ### disabled, since was only used for `valgrind` CI tests
steps:
- uses: actions/checkout@v3
- uses: cvmfs-contrib/github-action-cvmfs@v3
- uses: eic/run-cvmfs-osg-eic-shell@main
with:
platform-release: "jug_xl:nightly"
run: |
echo "[CI] install delphes"
deps/install_delphes.sh
echo "[CI] build epic-analysis"
source environ.sh
make ${{matrix.recipe}}
- uses: actions/upload-artifact@v3
with:
name: x_build_${{matrix.recipe}}
retention-days: 1
path: |
# epic-analysis
lib
src/*Dict.cxx
# delphes
deps/delphes
external
# mstwpdf
deps/mstwpdf/*.o
deps/mstwpdf/*.so
# adage
deps/adage/lib
deps/adage/src/*Dict.cxx
build_no_delphes:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- uses: cvmfs-contrib/github-action-cvmfs@v3
- uses: eic/run-cvmfs-osg-eic-shell@main
with:
platform-release: "jug_xl:nightly"
run: |
echo "[CI] build epic-analysis"
source environ.sh
EXCLUDE_DELPHES=1 make release
- uses: actions/upload-artifact@v3
with:
name: x_build_no_delphes
retention-days: 1
path: |
# epic-analysis
lib
src/*Dict.cxx
# mstwpdf
deps/mstwpdf/*.o
deps/mstwpdf/*.so
# adage
deps/adage/lib
deps/adage/src/*Dict.cxx
# DELPHES ---------------------------------------------------------------------------
# run delphes on a hepmc file
delphes_fastsim:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
include:
- { id: 1, options: --version hepmc.pythia6 --no-radcor --limit 5 --num-hepmc-events 150 --minQ2 1 } # max limit=30
- { id: 10, options: --version hepmc.pythia6 --no-radcor --limit 5 --num-hepmc-events 150 --minQ2 10 } # max limit=40
- { id: 100, options: --version hepmc.pythia6 --no-radcor --limit 5 --num-hepmc-events 150 --minQ2 100 } # max limit=50
- { id: 1000, options: --version hepmc.pythia6 --no-radcor --limit 5 --num-hepmc-events 150 --minQ2 1000 } # max limit=60
steps:
- uses: actions/checkout@v3
- uses: cvmfs-contrib/github-action-cvmfs@v3
- uses: eic/run-cvmfs-osg-eic-shell@main
env:
S3_ACCESS_KEY: ${{secrets.S3_ACCESS_KEY}}
S3_SECRET_KEY: ${{secrets.S3_SECRET_KEY}}
with:
platform-release: "jug_xl:nightly"
setup: environ.sh
run: |
echo "[CI] install delphes"
deps/install_delphes.sh
echo "[CI] download HEPMC files and run Delphes"
s3tools/add-host.sh
s3tools/s3tool.rb \
--energy ${{env.ebeam_en}}x${{env.pbeam_en}} \
--output ci \
--config datarec/ci/delphes_${{matrix.id}}.config \
${{matrix.options}}
- uses: actions/upload-artifact@v3
with:
name: x_fastsim_delphes
retention-days: 1
path: datarec
# DOWNLOAD FULLSIM ---------------------------------------------------------------------------
# download full simulation files and make config
download_fullsim:
runs-on: ubuntu-latest
strategy:
fail-fast: true
matrix:
include:
- { id: epic_latest, options: --version epic.latest --limit 2 --detector brycecanyon --no-radcor }
- { id: epic_previous, options: --version epic.previous --limit 2 --detector brycecanyon --no-radcor }
- { id: ecce, options: --version ecce.22.1 --limit 4 }
- { id: athena, options: --version athena.deathvalley-v1.0 --limit 2 }
steps:
- uses: actions/checkout@v3
- uses: cvmfs-contrib/github-action-cvmfs@v3
- uses: eic/run-cvmfs-osg-eic-shell@main
env:
S3_ACCESS_KEY: ${{secrets.S3_ACCESS_KEY}}
S3_SECRET_KEY: ${{secrets.S3_SECRET_KEY}}
with:
platform-release: "jug_xl:nightly"
setup: environ.sh
run: |
echo "[CI] download files from S3"
s3tools/add-host.sh
s3tools/s3tool.rb \
--energy ${{env.ebeam_en}}x${{env.pbeam_en}} \
--output ${{matrix.id}} \
--mode s \
--config s3files.config \
${{matrix.options}}
echo "[CI] cat config file"
cat s3files.config
- uses: actions/upload-artifact@v3
with:
name: x_fullsim_${{matrix.id}}
retention-days: 1
path: |
s3files.config
datarec
# ANALYSIS ---------------------------------------------------------------------------
# run analysis macros matrix for fastsim
analysis_fastsim:
needs:
- build_all
- delphes_fastsim
runs-on: ubuntu-latest
strategy:
fail-fast: true
matrix:
aname: [x_q2, p_eta, yRatio, single_bin]
recon: [Ele]
include:
- { aname: x_q2, recon: Mixed }
- { aname: x_q2, recon: JB }
- { aname: x_q2, recon: DA }
- { aname: x_q2, recon: Sigma }
- { aname: x_q2, recon: eSigma }
steps:
- uses: actions/checkout@v3
- uses: actions/download-artifact@v3
with:
name: x_build_release
- uses: actions/download-artifact@v3
with:
name: x_fastsim_delphes
path: x_fastsim_delphes
- uses: cvmfs-contrib/github-action-cvmfs@v3
- uses: eic/run-cvmfs-osg-eic-shell@main
with:
platform-release: "jug_xl:nightly"
setup: environ.sh
run: |
echo "[CI] job matrix params:"
echo "aname = ${{matrix.aname}}"
echo "recon = ${{matrix.recon}}"
echo "[CI] Delphes artifacts"
ls -R x_fastsim_delphes
echo "[CI] unpack Delphes artifacts"
mv -v x_fastsim_delphes/ci datarec/
echo "[CI] generate combined config file"
s3tools/src/generate-config-file.rb delphes.config ${{env.ebeam_en}}x${{env.pbeam_en}} datarec/ci/delphes*.config.list
echo "[CI] cat delphes.config"
cat delphes.config
echo "[CI] ANALYSIS MACRO"
${{env.root}} 'macro/ci/analysis_${{matrix.aname}}.C("delphes.config","fastsim.${{matrix.aname}}.${{matrix.recon}}","${{matrix.recon}}")'
- uses: actions/upload-artifact@v3
with:
name: analysis
retention-days: 7
path: out
# run analysis macros matrix for full simulation
analysis_fullsim:
needs:
- build_no_delphes
- download_fullsim
runs-on: ubuntu-latest
strategy:
fail-fast: true
matrix:
detector:
- epic_latest
- epic_previous
- athena
- ecce
aname: [x_q2, p_eta, yRatio, single_bin]
recon: [Ele]
include: # enable other recon methods for `aname==x_q2` only
- { aname: x_q2, recon: Mixed, detector: epic_latest } # FIXME: not sure how to avoid being repetitive...
- { aname: x_q2, recon: JB, detector: epic_latest }
- { aname: x_q2, recon: DA, detector: epic_latest }
- { aname: x_q2, recon: Sigma, detector: epic_latest }
- { aname: x_q2, recon: eSigma, detector: epic_latest }
- { aname: x_q2, recon: Mixed, detector: epic_previous }
- { aname: x_q2, recon: JB, detector: epic_previous }
- { aname: x_q2, recon: DA, detector: epic_previous }
- { aname: x_q2, recon: Sigma, detector: epic_previous }
- { aname: x_q2, recon: eSigma, detector: epic_previous }
- { aname: x_q2, recon: Mixed, detector: athena }
- { aname: x_q2, recon: JB, detector: athena }
- { aname: x_q2, recon: DA, detector: athena }
- { aname: x_q2, recon: Sigma, detector: athena }
- { aname: x_q2, recon: eSigma, detector: athena }
- { aname: x_q2, recon: Mixed, detector: ecce }
- { aname: x_q2, recon: JB, detector: ecce }
- { aname: x_q2, recon: DA, detector: ecce }
- { aname: x_q2, recon: Sigma, detector: ecce }
- { aname: x_q2, recon: eSigma, detector: ecce }
steps:
- uses: actions/checkout@v3
- uses: actions/download-artifact@v3
with:
name: x_build_no_delphes
- uses: actions/download-artifact@v3
with:
name: x_fullsim_${{matrix.detector}}
- uses: cvmfs-contrib/github-action-cvmfs@v3
- uses: eic/run-cvmfs-osg-eic-shell@main
env:
S3_ACCESS_KEY: ${{secrets.S3_ACCESS_KEY}}
S3_SECRET_KEY: ${{secrets.S3_SECRET_KEY}}
with:
platform-release: "jug_xl:nightly"
setup: environ.sh
run: |
echo "[CI] job matrix params:"
echo "aname = ${{matrix.aname}}"
echo "recon = ${{matrix.recon}}"
echo "[CI] cat s3files.config"
cat s3files.config
echo "[CI] ANALYSIS MACRO"
${{env.root_no_delphes}} 'macro/ci/analysis_${{matrix.aname}}.C("s3files.config","${{matrix.detector}}.${{matrix.aname}}.${{matrix.recon}}","${{matrix.recon}}")'
- uses: actions/upload-artifact@v3
with:
name: analysis
retention-days: 7
path: out
# POSTPROCESS ---------------------------------------------------------------------------
# run postprocess macros matrix for fastsim and fullsim
postprocess:
needs:
- analysis_fastsim
- analysis_fullsim
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
mode:
- fastsim
- epic_latest
- epic_previous
- athena
- ecce
pname: # list only jobs which will only use one (primary) recon method
- bin_test
- coverage2D_p_eta
- y_minima
- q2_weights_test
- eta_vs_p_forPID
recon: [Ele] # primary recon method(s)
include:
# use only primary recon method
- { pname: bin_test, aname: x_q2, pmacro: postprocess_bin_test.C }
- { pname: coverage2D_p_eta, aname: p_eta, pmacro: postprocess_p_eta.C }
- { pname: y_minima, aname: yRatio, pmacro: postprocess_yRatio.C }
- { pname: q2_weights_test, aname: single_bin, pmacro: postprocess_q2_weights.C }
- { pname: eta_vs_p_forPID, aname: single_bin, pmacro: postprocess_eta_vs_p_forPID.C }
# use all reconstruction methods: # FIXME: not sure how to avoid being repetitive...
- { mode: fastsim, pname: coverage2D_x_q2, recon: Ele, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: fastsim, pname: coverage2D_x_q2, recon: DA, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: fastsim, pname: coverage2D_x_q2, recon: eSigma, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: fastsim, pname: coverage2D_x_q2, recon: JB, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: fastsim, pname: coverage2D_x_q2, recon: Mixed, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: fastsim, pname: coverage2D_x_q2, recon: Sigma, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: epic_latest, pname: coverage2D_x_q2, recon: Ele, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: epic_latest, pname: coverage2D_x_q2, recon: DA, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: epic_latest, pname: coverage2D_x_q2, recon: eSigma, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: epic_latest, pname: coverage2D_x_q2, recon: JB, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: epic_latest, pname: coverage2D_x_q2, recon: Mixed, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: epic_latest, pname: coverage2D_x_q2, recon: Sigma, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: epic_previous, pname: coverage2D_x_q2, recon: Ele, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: epic_previous, pname: coverage2D_x_q2, recon: DA, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: epic_previous, pname: coverage2D_x_q2, recon: eSigma, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: epic_previous, pname: coverage2D_x_q2, recon: JB, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: epic_previous, pname: coverage2D_x_q2, recon: Mixed, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: epic_previous, pname: coverage2D_x_q2, recon: Sigma, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: athena, pname: coverage2D_x_q2, recon: Ele, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: athena, pname: coverage2D_x_q2, recon: DA, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: athena, pname: coverage2D_x_q2, recon: eSigma, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: athena, pname: coverage2D_x_q2, recon: JB, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: athena, pname: coverage2D_x_q2, recon: Mixed, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: athena, pname: coverage2D_x_q2, recon: Sigma, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: ecce, pname: coverage2D_x_q2, recon: Ele, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: ecce, pname: coverage2D_x_q2, recon: DA, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: ecce, pname: coverage2D_x_q2, recon: eSigma, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: ecce, pname: coverage2D_x_q2, recon: JB, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: ecce, pname: coverage2D_x_q2, recon: Mixed, aname: x_q2, pmacro: postprocess_x_q2.C }
- { mode: ecce, pname: coverage2D_x_q2, recon: Sigma, aname: x_q2, pmacro: postprocess_x_q2.C }
steps:
- uses: actions/checkout@v3
- uses: actions/download-artifact@v3
with:
name: x_build_no_delphes
- uses: actions/download-artifact@v3
with:
name: analysis
path: out
- uses: cvmfs-contrib/github-action-cvmfs@v3
- uses: eic/run-cvmfs-osg-eic-shell@main
with:
platform-release: "jug_xl:nightly"
setup: environ.sh
run: |
echo "[CI] job matrix params:"
echo "aname = ${{matrix.aname}}"
echo "pname = ${{matrix.pname}}"
echo "mode = ${{matrix.mode}}"
echo "recon = ${{matrix.recon}}"
echo "pmacro = ${{matrix.pmacro}}"
echo "[CI] POSTPROCESS MACRO"
ls out
mv -v out/${{matrix.mode}}.{${{matrix.aname}},${{matrix.pname}}}.${{matrix.recon}}.root # rename aname -> pname
${{env.root_no_delphes}} 'macro/ci/${{matrix.pmacro}}("out/${{matrix.mode}}.${{matrix.pname}}.${{matrix.recon}}.root")'
rm -v out/${{matrix.mode}}.${{matrix.pname}}.${{matrix.recon}}.root # rm analysis_root artifact
- uses: actions/upload-artifact@v3
with:
name: postprocess
retention-days: 30
path: |
out/*.images/*.png
out/*.root
# COMPARATORS ---------------------------------------------------------------------------
# run compare macros matrix for fastsim vs. fullsim
comparison:
needs:
- analysis_fastsim
- analysis_fullsim
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
pname: # list only jobs which will only use one (primary) recon method
- coverage_p_eta
- resolution_p_eta
recon: [Ele] # primary recon method(s)
include:
# use only primary recon method
- { pname: coverage_p_eta, aname: p_eta, xvar: p, yvar: eta }
- { pname: resolution_p_eta, aname: p_eta, xvar: p, yvar: eta }
# use all reconstruction methods:
## resolution
- { pname: resolution_x_q2, recon: Ele, aname: x_q2, xvar: x, yvar: q2 }
- { pname: resolution_x_q2, recon: Mixed, aname: x_q2, xvar: x, yvar: q2 }
- { pname: resolution_x_q2, recon: DA, aname: x_q2, xvar: x, yvar: q2 }
- { pname: resolution_x_q2, recon: JB, aname: x_q2, xvar: x, yvar: q2 }
- { pname: resolution_x_q2, recon: Sigma, aname: x_q2, xvar: x, yvar: q2 }
- { pname: resolution_x_q2, recon: eSigma, aname: x_q2, xvar: x, yvar: q2 }
## coverage
- { pname: coverage_x_q2, recon: Ele, aname: x_q2, xvar: x, yvar: q2 }
- { pname: coverage_x_q2, recon: Mixed, aname: x_q2, xvar: x, yvar: q2 }
- { pname: coverage_x_q2, recon: DA, aname: x_q2, xvar: x, yvar: q2 }
- { pname: coverage_x_q2, recon: JB, aname: x_q2, xvar: x, yvar: q2 }
- { pname: coverage_x_q2, recon: Sigma, aname: x_q2, xvar: x, yvar: q2 }
- { pname: coverage_x_q2, recon: eSigma, aname: x_q2, xvar: x, yvar: q2 }
steps:
- uses: actions/checkout@v3
- uses: actions/download-artifact@v3
with:
name: x_build_no_delphes
- uses: actions/download-artifact@v3
with:
name: analysis
path: out
- uses: cvmfs-contrib/github-action-cvmfs@v3
- uses: eic/run-cvmfs-osg-eic-shell@main
with:
platform-release: "jug_xl:nightly"
setup: environ.sh
run: |
echo "[CI] job matrix params:"
echo "aname = ${{matrix.aname}}"
echo "pname = ${{matrix.pname}}"
echo "recon = ${{matrix.recon}}"
echo "xvar = ${{matrix.xvar}}"
echo "yvar = ${{matrix.yvar}}"
echo "[CI] COMPARATOR MACRO: ePIC"
macro/ci/comparator_run.sh ${{matrix.aname}} ${{matrix.pname}} ${{matrix.recon}} ${{matrix.xvar}} ${{matrix.yvar}} \
"ePIC Latest" "epic_latest" \
"ePIC Previous" "epic_previous" \
"ECCE" "ecce" \
"Delphes" "fastsim" \
"epic_productions"
# echo "[CI] COMPARATOR MACRO: LEGACY"
# macro/ci/comparator_run.sh ${{matrix.aname}} ${{matrix.pname}} ${{matrix.recon}} ${{matrix.xvar}} ${{matrix.yvar}} \
# "Delphes Pythia6 (no radcor)" "fastsim" \
# "ePIC Arches (no radcor)" "epic_latest" \
# "ATHENA" "athena" \
# "ECCE" "ecce" \
# "LEGACY"
- uses: actions/upload-artifact@v3
with:
name: comparison
retention-days: 30
path: |
out/comparison*.images/*.png
out/comparison*.root
# ARTIFACTS ---------------------------------------------------------------------------
# collect artifacts into one directory
collect:
needs:
- postprocess
- comparison
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- uses: actions/download-artifact@v3
with:
name: postprocess
path: results
- uses: actions/download-artifact@v3
with:
name: comparison
path: results
- name: tree_artifacts
run: tree results
- name: cull
run: |
find results -name "*.root" -print | xargs rm -v
rm -v results/*y_minima*/canv*.png
tree results
- name: rename-dirs
run: |
for d in $(ls -d results/*.images); do \
d=$(echo $d | sed 's;/$;;'); \
mv -v $d $(echo $d | sed 's;\.images$;;'); \
done
tree results
- name: merge_recon
run: |
macro/ci/merge-recon.sh results resolution_x_q2
macro/ci/merge-recon.sh results coverage_x_q2
macro/ci/merge-recon.sh results coverage2D_x_q2
tree results
- name: merge_fastfull
run: |
macro/ci/merge-fastfull.sh results \
epic_latest \
epic_previous \
ecce \
athena
tree results
- uses: actions/upload-artifact@v3
with:
retention-days: 90
name: _FULL_RESULTS
path: results