Updates bibliography

README.Rmd

@@ -1,5 +1,6 @@
 ---
 output: github_document
+knit: (function(input, ...) devtools::build_readme())
 ---
 
 <!-- README.md is generated from README.Rmd. Please edit that file -->
@@ -13,7 +14,6 @@ knitr::opts_chunk$set(
 ```
 # ggnewscale <img src='man/figures/logo.png' align="right" height="138.5" />
 
-
 <!-- badges: start -->
 
 [![R build
@@ -32,7 +32,7 @@ For another way of defining multiple scales, you can also try [relayer](https://
 
 ## How to install
 
-You can install ggnewscale from CRAN with: 
+You can install ggnewscale from CRAN with:
 
 ```{r CRAN-installation, eval = FALSE}
 install.packages("ggnewscale")

README.md

@@ -81,131 +81,203 @@ Thanks!
 \[1\] E. Akhil Prakash, T. Hromádková, T. Jabir, et al. “Dissemination
 of Multidrug Resistant Bacteria to the Polar Environment - Role of the
 Longest Migratory Bird Arctic Tern (Sterna Paradisaea)”. In: *Science of
-The Total Environment* (Dec. 2021), p. 152727. ISSN: 0048-9697. DOI:
-10.1016/j.scitotenv.2021.152727.
+The Total Environment* (Dec. 31, 2021), p. 152727. ISSN: 0048-9697. DOI:
+10.1016/j.scitotenv.2021.152727. \<URL:
+<https://www.sciencedirect.com/science/article/pii/S0048969721078062>\>
+(visited on 01/03/2022).
 
 \[2\] R. AminiTabrizi, R. M. Wilson, J. D. Fudyma, et al. “Controls on
 Soil Organic Matter Degradation and Subsequent Greenhouse Gas Emissions
-Across a Permafrost Thaw Gradient in Northern Sweden”. In: *Front. Earth
-Sci.* 8 (2020). ISSN: 2296-6463. DOI: 10.3389/feart.2020.557961.
+Across a Permafrost Thaw Gradient in Northern Sweden”. In: *Frontiers in
+Earth Science* 8 (2020). ISSN: 2296-6463. DOI:
+10.3389/feart.2020.557961. \<URL:
+<https://www.frontiersin.org/articles/10.3389/feart.2020.557961/full>\>
+(visited on 03/03/2021).
 
 \[3\] X. Ding, K. Liu, Q. Yan, et al. “Sugar and Organic Acid
 Availability Modulate Soil Diazotroph Community Assembly and Species
-Co-Occurrence Patterns on the Tibetan Plateau”. In: *Appl Microbiol
-Biotechnol* (Oct. 2021). ISSN: 1432-0614. DOI:
-10.1007/s00253-021-11629-9.
+Co-Occurrence Patterns on the Tibetan Plateau”. In: *Applied
+Microbiology and Biotechnology* (Oct. 18, 2021). ISSN: 1432-0614. DOI:
+10.1007/s00253-021-11629-9. \<URL:
+<https://doi.org/10.1007/s00253-021-11629-9>\> (visited on 10/21/2021).
 
 \[4\] T. G. Drivas, A. Lucas, and M. D. Ritchie. “eQTpLot: A
 User-Friendly R Package for the Visualization of Colocalization between
-eQTL and GWAS Signals”. In: *BioData Mining* 14.1 (Jul. 2021), p. 32.
-ISSN: 1756-0381. DOI: 10.1186/s13040-021-00267-6.
-
-\[5\] M. C. Granovetter, L. Ettensohn, and M. Behrmann. “With Childhood
+eQTL and GWAS Signals”. In: *BioData Mining* 14.1 (Jul. 17, 2021), p.
+32. ISSN: 1756-0381. DOI: 10.1186/s13040-021-00267-6. \<URL:
+<https://doi.org/10.1186/s13040-021-00267-6>\> (visited on 07/21/2021).
+
+\[5\] B. D. Golas, B. Goodell, and C. T. Webb. “Host Adaptation to Novel
+Pathogen Introduction: Predicting Conditions That Promote Evolutionary
+Rescue”. In: *Ecology Letters* 24.10 (2021), pp. 2238-2255. ISSN:
+1461-0248. DOI: 10.1111/ele.13845. \<URL:
+<https://onlinelibrary.wiley.com/doi/abs/10.1111/ele.13845>\> (visited
+on 03/25/2022).
+
+\[6\] M. C. Granovetter, L. Ettensohn, and M. Behrmann. “With Childhood
 Hemispherectomy, One Hemisphere Can Support—But Is Suboptimal for—Word
-and Face Recognition”. In: *bioRxiv* (Nov. 2020), p. 2020.11.06.371823.
-DOI: 10.1101/2020.11.06.371823.
+and Face Recognition”. In: *bioRxiv* (Nov. 08, 2020), p.
+2020.11.06.371823. DOI: 10.1101/2020.11.06.371823. \<URL:
+<https://www.biorxiv.org/content/10.1101/2020.11.06.371823v1>\> (visited
+on 03/03/2021).
 
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+\[7\] A. T. Hinsu, K. J. Panchal, R. J. Pandit, et al. “Characterizing
 Rhizosphere Microbiota of Peanut (Arachis Hypogaea L.) from Pre-Sowing
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-(Aug. 2021), p. 17457. ISSN: 2045-2322. DOI: 10.1038/s41598-021-97071-3.
+to Post-Harvest of Crop under Field Conditions”. In: *Scientific
+Reports* 11.1 (1 Aug. 31, 2021), p. 17457. ISSN: 2045-2322. DOI:
+10.1038/s41598-021-97071-3. \<URL:
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+09/06/2021).
 
-\[7\] M. Jenckel, I. Smith, T. King, et al. “Distribution and Genetic
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 Diversity of Hepatitis E Virus in Wild and Domestic Rabbits in
-Australia”. In: *Pathogens* 10.12 (Dec. 2021), p. 1637. DOI:
-10.3390/pathogens10121637.
+Australia”. In: *Pathogens* 10.12 (12 Dec. 2021), p. 1637. DOI:
+10.3390/pathogens10121637. \<URL:
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 of Testis Gene Regulation and Pathology in Five Mouse Strains”. In:
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-Lukassen, p. e43966. ISSN: 2050-084X. DOI: 10.7554/eLife.43966.
+*eLife* 8 (Jun. 25, 2019). Ed. by D. Bourc’his, P. J. Wittkopp and S.
+Lukassen, p. e43966. ISSN: 2050-084X. DOI: 10.7554/eLife.43966. \<URL:
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 and Demographic History of Han Chinese Inferred from Haplotype Network
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-DOI: 10.1101/2020.07.03.166413.
+of 111,000 Genomes”. In: *bioRxiv* (Jul. 04, 2020), p.
+2020.07.03.166413. DOI: 10.1101/2020.07.03.166413. \<URL:
+<https://www.biorxiv.org/content/10.1101/2020.07.03.166413v2>\> (visited
+on 03/03/2021).
 
-\[10\] Z. Lapp, R. Crawford, A. Miles-Jay, et al. “Regional Spread of
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 blaNDM-1-containing Klebsiella Pneumoniae ST147 in Post-Acute Care
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+ISSN: 1058-4838. DOI: 10.1093/cid/ciab457. \<URL:
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+\[12\] E. Merino Tejero, D. Lashgari, R. García-Valiente, et al.
 “Multiscale Modeling of Germinal Center Recapitulates the Temporal
 Transition From Memory B Cells to Plasma Cells Differentiation as
-Regulated by Antigen Affinity-Based Tfh Cell Help”. In: *Front Immunol*
-11 (Feb. 2021). ISSN: 1664-3224. DOI: 10.3389/fimmu.2020.620716.
+Regulated by Antigen Affinity-Based Tfh Cell Help”. In: *Frontiers in
+Immunology* 11 (Feb. 05, 2021). ISSN: 1664-3224. DOI:
+10.3389/fimmu.2020.620716. pmid: 33613551. \<URL:
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+\[13\] G. Papacharalampous, H. Tyralis, S. M. Papalexiou, et al.
 “Global-Scale Massive Feature Extraction from Monthly Hydroclimatic Time
 Series: Statistical Characterizations, Spatial Patterns and Hydrological
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+Similarity”. In: *Science of The Total Environment* 767 (May. 01, 2021),
+p. 144612. ISSN: 0048-9697. DOI: 10.1016/j.scitotenv.2020.144612. \<URL:
+<https://www.sciencedirect.com/science/article/pii/S0048969720381432>\>
+(visited on 03/03/2021).
+
+\[14\] M. A. Prang, L. Zywucki, M. Körner, et al. “Differences in
+Sibling Cooperation in Presence and Absence of Parental Care in a Genus
+with Interspecific Variation in Offspring Dependence”. In: *Evolution*
+76.2 (2022), pp. 320-331. ISSN: 1558-5646. DOI: 10.1111/evo.14414.
+\<URL: <https://onlinelibrary.wiley.com/doi/abs/10.1111/evo.14414>\>
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 Conceptual-Data-Driven Approach for Improved Hydrological Simulations”.
-In: *Environmental Modelling & Software* (Jan. 2022), p. 105326. ISSN:
-1364-8152. DOI: 10.1016/j.envsoft.2022.105326.
+In: *Environmental Modelling & Software* (Jan. 16, 2022), p. 105326.
+ISSN: 1364-8152. DOI: 10.1016/j.envsoft.2022.105326. \<URL:
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-\[14\] A. Rutz, M. Sorokina, J. Galgonek, et al. “Open Natural Products
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 *Vegetation Responses to 26 Years of Warming at Latnjajaure Field
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-\[16\] L. Seep, Z. Razaghi-Moghadam, and Z. Nikoloski. “Reaction Lumping
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-\[17\] O. Seppälä. “Spatial and Temporal Drivers of Soil Respiration in
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 GEOSCIENCES AND GEOGRAPHY GEOGRAPHY: UNIVERSITY OF HELSINKI, 2020.
 
-\[18\] L. Shah, C. A. Arnillas, and G. B. Arhonditsis. “Characterizing
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 Temporal Trends of Meteorological Extremes in Southern and Central
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+Selection of Vaccine Epitopes in SARS-CoV-2”. In: *bioRxiv* (Jun. 04,
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+
+\[22\] S. N. Thiede, E. S. Snitkin, W. Trick, et al. “Genomic
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+
+\[23\] A. Torres-Espín, A. Chou, J. R. Huie, et al. “Reproducible
 Analysis of Disease Space via Principal Components Using the Novel R
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-Outcomes of Symbiotic Infection in Aphids: A Meta-Analysis*. Nov. 2021.
-DOI: 10.32942/osf.io/nxdaw.
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+*EcoEvoRxiv* (Mar. 25, 2022). DOI: 10.32942/osf.io/nxdaw. \<URL:
+<https://ecoevorxiv.org/nxdaw/>\> (visited on 03/25/2022).
 
-\[22\] L. Weidenauer and M. Quadroni. “Phosphorylation in the Charged
-Linker Modulates Interactions and Secretion of Hsp90*β*”. In: *Cells*
-10.7 (Jul. 2021), p. 1701. DOI: 10.3390/cells10071701.
+\[25\] L. Weidenauer and M. Quadroni. “Phosphorylation in the Charged
+Linker Modulates Interactions and Secretion of Hsp90β”. In: *Cells* 10.7
+(7 Jul. 2021), p. 1701. DOI: 10.3390/cells10071701. \<URL:
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-\[23\] D. Wendisch, O. Dietrich, T. Mari, et al. “SARS-CoV-2 Infection
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 Triggers Profibrotic Macrophage Responses and Lung Fibrosis”. In: *Cell*
-(Nov. 2021). ISSN: 0092-8674. DOI: 10.1016/j.cell.2021.11.033.
+(Nov. 27, 2021). ISSN: 0092-8674. DOI: 10.1016/j.cell.2021.11.033.
+\<URL:
+<https://www.sciencedirect.com/science/article/pii/S0092867421013830>\>
+(visited on 12/11/2021).
 
-\[24\] R. J. Wright, M. G. I. Langille, and T. R. Walker. “Food or Just
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 a Free Ride? A Meta-Analysis Reveals the Global Diversity of the
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-\[26\] P. Zannini, F. Frascaroli, J. Nascimbene, et al. “Sacred Natural
+Plastisphere”. In: *The ISME Journal* 15.3 (3 Mar. 2021), pp. 789-806.
+ISSN: 1751-7370. DOI: 10.1038/s41396-020-00814-9. \<URL:
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+
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+“Ontogenetic Dietary Shifts in North American Hadrosaurids”. In:
+*Cretaceous Research* (Feb. 23, 2022), p. 105177. ISSN: 0195-6671. DOI:
+10.1016/j.cretres.2022.105177. \<URL:
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+(visited on 02/26/2022).
+
+\[29\] A. Yan, J. Butcher, D. Mack, et al. “Virome Sequencing of the
+Human Intestinal Mucosal–Luminal Interface”. In: *Frontiers in Cellular
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+10.3389/fcimb.2020.582187. pmid: 33194818. \<URL:
+<https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7642909/>\> (visited on
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+*Biodiversity and Conservation* (Sep. 30, 2021). ISSN: 1572-9710. DOI:
+10.1007/s10531-021-02296-3. \<URL:
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 </details>
 
 ## Usage