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Issues list

build: upgrade gunicorn
#254 opened May 18, 2024 by uniqueg
Remove support for task monitor in cwl-WES dependencies Pull requests that update a dependency file status: in progress Currently being worked on type flag: breaking change Proposed change breaks current API type: maintenance Related to general repository maintenance type: security Related to security workload: days Likely takes days to resolve
#250 opened Nov 15, 2022 by kushagra189
Implement access management priority: medium Medium priority type: auth Related to authorization or authentication type: security Related to security workload: days Likely takes days to resolve
#196 opened Jul 21, 2020 by uniqueg
Document logging to files flag: good 1st issue Good for newcomers priority: low Low priority type: docs Improvements or additions to documentation workload: hours Likely takes hours to resolve
#195 opened Jul 21, 2020 by uniqueg
Task monitor daemon process may limit scalabilty priority: medium Medium priority type: maintenance Related to general repository maintenance workload: weeks Likely takes weeks to resolve
#194 opened Jul 21, 2020 by uniqueg
Run the CWL 1.0 and 1.1 conformance tests against a cwl-WES endpoint during CI type: testing Related to code testing workload: hours Likely takes hours to resolve
#187 opened Jun 10, 2020 by mr-c
Service downloads all output files priority: low Low priority type: bug Something isn't working workload: hours Likely takes hours to resolve
#157 opened May 6, 2020 by uniqueg
Refactor volumes for Flask & Celery priority: medium Medium priority type: delivery Related to packaging, deployment etc. type: maintenance Related to general repository maintenance workload: days Likely takes days to resolve
#156 opened May 6, 2020 by uniqueg
Update core dependencies priority: low Low priority type: maintenance Related to general repository maintenance workload: days Likely takes days to resolve
#152 opened Apr 20, 2020 by uniqueg
Certbot / Let's encrypt fails on OpenShift deployment priority: low Low priority type: bug Something isn't working type: security Related to security workload: hours Likely takes hours to resolve
#149 opened Apr 17, 2020 by uniqueg
Spec compliance for run/task logs priority: high High priority status: in progress Currently being worked on type flag: required by specs Compliance with specs requires this change type: maintenance Related to general repository maintenance workload: days Likely takes days to resolve
#128 opened Nov 1, 2019 by uniqueg
STDOUT/STDERR logs to separate endpoints priority: high High priority status: in progress Currently being worked on type: feature New feature or request type flag: required by specs Compliance with specs requires this change type: maintenance Related to general repository maintenance workload: days Likely takes days to resolve
#127 opened Nov 1, 2019 by uniqueg
Automatically create data subdirectories upon first start of app flag: good 1st issue Good for newcomers priority: low Low priority type: feature New feature or request workload: minutes Likely takes minutes to resolve
#122 opened Oct 30, 2019 by uniqueg
No outputs for cmsearch workflow priority: medium Medium priority type: bug Something isn't working type flag: required by specs Compliance with specs requires this change workload: minutes Likely takes minutes to resolve
#101 opened Jul 10, 2019 by aniewielska
Implement strategy to pass secrets during build time flag: good 1st issue Good for newcomers priority: low Low priority type: security Related to security workload: minutes Likely takes minutes to resolve
#64 opened Oct 9, 2018 by uniqueg
Password protection for database and broker flag: good 1st issue Good for newcomers priority: low Low priority type: security Related to security workload: minutes Likely takes minutes to resolve
#63 opened Oct 9, 2018 by uniqueg
Provide detailed documentation priority: medium Medium priority type: docs Improvements or additions to documentation workload: days Likely takes days to resolve
#62 opened Oct 9, 2018 by uniqueg
Add tests flag: good 1st issue Good for newcomers type flag: meta Generic issue that will spawn more specific issues type: testing Related to code testing
#61 opened Oct 9, 2018 by uniqueg
Re-implement run state QUEUED and replace current QUEUED state with INITIALIZING priority: medium Medium priority type flag: required by specs Compliance with specs requires this change type: maintenance Related to general repository maintenance workload: hours Likely takes hours to resolve
#59 opened Oct 9, 2018 by uniqueg
Task state change callback mechanism priority: low Low priority status flag: help wanted Extra attention is needed status: on hold Won't be fixed for now type: feature New feature or request type flag: spec change Proposed change requires spec changes workload: days Likely takes days to resolve
#57 opened Oct 9, 2018 by uniqueg
Lifetime of auth tokens limiting workflow execution runtime priority: medium Medium priority status flag: help wanted Extra attention is needed type: auth Related to authorization or authentication workload: days Likely takes days to resolve
#52 opened Oct 9, 2018 by uniqueg
Database life cycle management flag: good 1st issue Good for newcomers priority: low Low priority type: maintenance Related to general repository maintenance workload: hours Likely takes hours to resolve
#22 opened Aug 24, 2018 by uniqueg
ProTip! Updated in the last three days: updated:>2024-12-18.