fixing ci/cd #162
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| name: GitHub CI/CD Workflow | |
| on: [push, pull_request] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| container: | |
| image: ubuntu:24.04 | |
| env: | |
| OPENSSL_DIR: /usr/include/openssl | |
| OPENSSL_LIB_DIR: /usr/lib/x86_64-linux-gnu | |
| OPENSSL_INCLUDE_DIR: /usr/include/openssl | |
| steps: | |
| - name: Install dependencies | |
| run: | | |
| apt-get update | |
| apt-get install -y curl git build-essential libssl-dev | |
| - uses: actions/checkout@v4 # checkout the repository | |
| - name: Install Rust | |
| run: | | |
| curl --proto '=https' --tlsv1.2 -sSf https://sh.rustup.rs | sh -s -- -y | |
| echo "$HOME/.cargo/bin" >> $GITHUB_PATH | |
| - name: Set up JDK 11 # required for build-models.sh | |
| uses: actions/setup-java@v3 | |
| with: | |
| distribution: 'adopt' | |
| java-version: '11' | |
| - name: Install Go | |
| uses: actions/setup-go@v4 | |
| with: | |
| go-version: '^1.22' | |
| - name: Install Funnel | |
| run: | | |
| if [ -d "funnel" ]; then rm -Rf funnel; fi | |
| git clone https://github.com/ohsu-comp-bio/funnel.git | |
| cd funnel && make && make install && cd .. | |
| - uses: actions/checkout@v4 # checkout the repository | |
| - name: Build models | |
| run: | | |
| bash ./build-models.sh | |
| - name: Build | |
| run: | | |
| cargo build --verbose | |
| - name: Run tests | |
| run: | | |
| bash ./run-tests.sh | |
| - name: Lint | |
| run: | | |
| cargo clippy -- -D warnings | |
| - name: Format | |
| run: | | |
| cargo fmt -- ./lib/src/serviceinfo/models/*.rs # workaround to fix autogenerated code formatting | |
| cargo fmt -- ./lib/src/tes/models/*.rs | |
| cargo fmt -- --check |