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Fix/obs unit db ids#72

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nlakmouri wants to merge 28 commits intomasterelixir-europe/plant-brapi-etl-faidare:masterfrom fix/obsUnit-DbIdselixir-europe/plant-brapi-etl-faidare:fix/obsUnit-DbIdsCopy head branch name to clipboard

+238-1,641

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Commits on Jun 7, 2024

• Remove deprecated dependencies

  cpommier

  committed
  fda28db

Commits on Jun 21, 2024

• Base64 encoding for DbId fields of other document types within observationUnit documents (still observationVariableDbId). fix GNP-6529

  nlakmouri

  committed
  a4d3a5b

• Encoding all concerned DbId to base64 in observationUnit documents using a stack for handling data structures values. fix GNP-6529

  nlakmouri

  committed
  5e66cb0

Commits on Jun 24, 2024

• correcting some typing errors. fix GNP-6529

  nlakmouri

  committed
  a0eb311

• Update datadiscovery_cards.py

  nlakmouri

  authored
  11ea9db

Commits on Jul 9, 2024

• The observationVariableDbId is not ebase64 encoded anymore. fix GNP-6542

  nlakmouri

  committed
  9d7ff88

• Handle DbId to not be encoded when their names are none or empty. fix GNP-6541

  nlakmouri

  committed
  04a2c8b

Commits on Jul 16, 2024

• Change the _handle_DbId_URI method. fix GNP-6529

  nlakmouri

  committed
  9608eb3

• Merge branch 'fix/obsUnit-DbIds' of github.com:elixir-europe/plant-brapi-etl-faidare into fix/obsUnit-DbIds

  nlakmouri

  committed
  974ea13

• Forcing to Python 3.12

  Show description for 394b30b
  cpommier

  committed
  394b30b

• Correcting integration tests

  cpommier

  committed
  67208bd

• Correcting integration tests

  cpommier

  committed
  fa02ff0

• Change test_basic_function

  nlakmouri

  committed
  3da7f03

• Change test_basic_mapping

  nlakmouri

  committed
  2a64a03

• Change test_season_transform

  nlakmouri

  committed
  858e6ed

• Change test_germplasmName_transform

  nlakmouri

  committed
  be728aa

• Merge pull request #73 from elixir-europe/feat/upgradeToPython3.12

  Show description for 3a1da00
  nlakmouri

  authored
  3a1da00

Commits on Jul 20, 2024

• Handling PHIS generating JSON and not JSON lines

  cpommier

  committed
  6519459

• Handling study URL, needed from studyCards

  cpommier

  committed
  7897c68

Commits on Jul 31, 2024

• Add the make_hashable method to resolve unhashable type error

  nlakmouri

  committed
  a35bd63

• Merge pull request #74 from elixir-europe/feat/upgradeToPython3.12

  Show description for baba4a6
  nlakmouri

  authored
  baba4a6

Commits on Aug 1, 2024

• Add unit tests for observationUnit documents. Fix GNP-6543

  nlakmouri

  committed
  c68e99e

Commits on Aug 2, 2024

• Correct the expected study document for tests: add the url item

  nlakmouri

  committed
  5acddb1

Commits on Aug 12, 2024

• Enhance observationUnit unit tests: sort JSON lists before comparing to expected output. GNP-6543

  nlakmouri

  committed
  6cfea97

Commits on Aug 16, 2024

• Comment the _handle_DbId_URI method

  nlakmouri

  committed
  0457b83

• Rectify the name of the expected ZIP file for the observation_unit test.

  nlakmouri

  committed
  9815c3b

• Merge pull request #75 from elixir-europe/feat/upgradeToPython3.12

  Show description for 7ed5b4a
  nlakmouri

  authored
  7ed5b4a

Commits on Nov 8, 2024

• Cleaning obsolete code and removing corresponding tests.

  cpommier

  committed
  d23b9e0