fixing display of instructions for creating a bibliography #1446
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bedroesb
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Jan 18, 2024
Co-authored-by: Bert Droesbeke <[email protected]>
bedroesb
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Mar 26, 2024
* Automatic tool/resource-list update (#1396) * Update tool/resource_list.yaml * Update plant_phenomics_assembly.md * Update plant_sciences.md --------- Co-authored-by: bedroesb <[email protected]> Co-authored-by: Bert Droesbeke <[email protected]> * add editors to alumni (#1433) * Update csc_assembly.md (#1429) * Update csc_assembly.md We updated our tool assembly. We would also have a new picture, but I don't know how I can upload it. * New csc tool assembly picture New csc tool assembly picture * Update csc_assembly.md changed the picture name to fi_csc_assembly_v2.svg * Update csc_assembly.md * Update pages/tool_assembly/csc_assembly.md Co-authored-by: Federico Bianchini <[email protected]> * Update pages/tool_assembly/csc_assembly.md ok! Co-authored-by: Federico Bianchini <[email protected]> * Update pages/tool_assembly/csc_assembly.md Co-authored-by: Federico Bianchini <[email protected]> * Update pages/tool_assembly/csc_assembly.md Co-authored-by: Federico Bianchini <[email protected]> * Update pages/tool_assembly/csc_assembly.md Co-authored-by: Federico Bianchini <[email protected]> * delete old image * Update news.yml Adding news about the refreshed CSC tool assembly page. --------- Co-authored-by: Nazeeefa <[email protected]> Co-authored-by: Federico Bianchini <[email protected]> Co-authored-by: bedroesb <[email protected]> * Adding a bibliography (#1434) * Adding bibliography * Update style_guide.md (#1435) --------- Co-authored-by: Korbinian Bösl <[email protected]> * Update nels_assembly.md (#1436) Using a country keyword for a tool assembly might create undesired results when courses for other independent national resources/tools are registered into TeSS. With the current suggestion some results of the query get lost, but maybe the annotations on TeSS should be improved (e.g. including explicitly NeLS as a keyword or similar). * Fairtracks assembly (#1419) * first draft of FAIRtracks tool assembly * adding EMBL-EBI to affiliations * Update no_resources.md * Update no_resources.md * Update fairtracks_assembly.md Added description metadata * Update fairtracks_assembly.md minor text improvements * adding link to training events on TeSS * Adding TeSS to the omnipy tool entry * revision from Sveinung * cross-referencing domain pages * revision of FAIRtracks assembly * replacing figure with new version based on feedback from the editors * Update news.yml news item on FAIRtracks tool assembly page * Update news.yml fixing wrong indentation * adding newline * Update news.yml updated date of news item --------- Co-authored-by: bedroesb <[email protected]> * Slight clarification (#1438) * Update fi_resources.md (#1439) * Update fi_resources.md Filling out "instance_of" field for FEGA Finland (instance of EGA) * Update fi_resources.md --------- Co-authored-by: Nazeeefa <[email protected]> * Update se_resources.md (#1430) * Update se_resources.md Review of all links and resources, and update where necessary * Update se_resources.md * Add FEGA-SE to metadata * Update tool/resource_list.yaml (#1440) Co-authored-by: bedroesb <[email protected]> * Update style_guide.md (#1442) * Update style_guide.md make bibliography as header * Add suggestions * Add full stop --------- Co-authored-by: Bert Droesbeke <[email protected]> * fixing display of instructions for creating a bibliography (#1446) * fixing display of instructions for creating a bibliography * Update pages/contribute/style_guide.md Co-authored-by: Bert Droesbeke <[email protected]> --------- Co-authored-by: Bert Droesbeke <[email protected]> * Update news.yml (#1449) added news about RIR * Update tool/resource_list.yaml (#1451) Co-authored-by: bedroesb <[email protected]> * Ml domain (#1443) * Adding md file for domain page on machine-learning * Adding domain page for ML to the sidebar * Changing authir name to match the one recorded in the contributors file * Update machine_learning.md * Update tool_and_resource_list.yml * Update machine_learning.md * Update references.bib * Update machine_learning.md * Fixing syntax for bibliography * minor polishing of bib file * Update machine_learning.md * Adding missing authors based on information from the draft Google document * Update machine_learning.md Minor text polishing and fixed indentation for nested lists. * Update tool_and_resource_list.yml * Update tool_and_resource_list.yml * updating page metadata * adding news item about ML domain page * minor tweaks of ML domain page * shortening title to avoid splitting in two lines * polishing list of tools * Update machine_learning.md * Update pages/your_domain/machine_learning.md * shortening long title, splitting wall of text in smaller paragraphs, adding again list that were lost in the conversion from Google document * polishing bib file * Update data_management.yml * Update news.yml * removed duplicate entry for Schema.org * removing license from tools and resources list * Update machine_learning.md --------- Co-authored-by: Stella Fragkouli <[email protected]> * improved bibtex entries for ML domain page (#1455) * Replaced broken links in National page of Estonia (#1452) * Update ee_resources.md, changed broken links * Update ee_resources.md * Update ee_resources.md * Update ee_resources.md * Update ee_resources.md minor fix --------- Co-authored-by: Nazeeefa <[email protected]> * Improved bibliography (#1448) * take away and * Update references.bib (#1454) --------- Co-authored-by: Korbinian Bösl <[email protected]> * Update news.yml (#1453) Added linked PR to new item * Update tool/resource_list.yaml (#1459) Co-authored-by: bedroesb <[email protected]> * Update email Bert Droesbeke * Update email Bert Droesbeke * Adding Daniel to past editors (#1460) * Take Daniel out of the CODEOWNERS * Update tool/resource_list.yaml (#1461) Co-authored-by: bedroesb <[email protected]> * Update tool/resource_list.yaml (#1462) Co-authored-by: bedroesb <[email protected]> * changing bibliography style to nature (#1456) * changing bibliography style to nature * custom nature bib tex style --------- Co-authored-by: bedroesb <[email protected]> * Adding metadata standards to the table of tools and resources (#1463) * Update existing_data.md (#1465) * Update no_resources.md (#1444) * Update no_resources.md * added VID resources * added normen chapter on privacy in research * Update no_resources.md * Update tool/resource_list.yaml (#1467) Co-authored-by: bedroesb <[email protected]> * Adding rss feed to track RDMkit news (#1466) * adding rss feed for news * fix xml * add ixon * Rounded video * Update tool/resource_list.yaml (#1468) Co-authored-by: bedroesb <[email protected]> * Update nl_resources.md (#1469) * Update nl_resources.md Added cBioPortal as a Dutch National Resource, requested by Lygature/EOSC4Cancer * Update nl_resources.md fixed the faulty URL for cBioPortal --------- Co-authored-by: Diana Pilvar <[email protected]> * Improve navigation by aligning the related pages with navigation tiles (#1366) * same graphics * fix type config * with icons * better theming * fix assembly * less css * variables * fix white * gray background * absolute path * relative link * variable for white * anchor fix * with shadow * smaller anchor * fix popping shadow * no shadow * smaller font * add new version * default shadow * different sizes * replace fix * replace fix * latest evrsion * primary color buttons * add news item * Update _data/news.yml Co-authored-by: Marina Popleteeva <[email protected]> * Update news.yml --------- Co-authored-by: Marina Popleteeva <[email protected]> * Adding Gil Poiares-Oliveira as an editorial member (#1471) * add @GilOliveira * Change Gil's email to BioData.pt --------- Co-authored-by: Gil Poiares-Oliveira <[email protected]> * Update tool_and_resource_list.yml Added the tools for the health data page. --------- Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: bedroesb <[email protected]> Co-authored-by: Bert Droesbeke <[email protected]> Co-authored-by: Siiri Fuchs <[email protected]> Co-authored-by: Nazeeefa <[email protected]> Co-authored-by: Federico Bianchini <[email protected]> Co-authored-by: bedroesb <[email protected]> Co-authored-by: Korbinian Bösl <[email protected]> Co-authored-by: Sveinung Gundersen <[email protected]> Co-authored-by: YvonneKallberg <[email protected]> Co-authored-by: floradanna <[email protected]> Co-authored-by: wittigue <[email protected]> Co-authored-by: Stella Fragkouli <[email protected]> Co-authored-by: Diana Pilvar <[email protected]> Co-authored-by: bedroesb <[email protected]> Co-authored-by: MijkeJetten <[email protected]> Co-authored-by: Marina Popleteeva <[email protected]> Co-authored-by: Gil Poiares-Oliveira <[email protected]>
smza
added a commit
that referenced
this pull request
Mar 27, 2024
* Create health_data.md * Update health_data.md Added content * Update health_data.md * Update health_data.md Added information about TEHDAS and HealthData@EU * Update tool_and_resource_list.yml (#1472) * Automatic tool/resource-list update (#1396) * Update tool/resource_list.yaml * Update plant_phenomics_assembly.md * Update plant_sciences.md --------- Co-authored-by: bedroesb <[email protected]> Co-authored-by: Bert Droesbeke <[email protected]> * add editors to alumni (#1433) * Update csc_assembly.md (#1429) * Update csc_assembly.md We updated our tool assembly. We would also have a new picture, but I don't know how I can upload it. * New csc tool assembly picture New csc tool assembly picture * Update csc_assembly.md changed the picture name to fi_csc_assembly_v2.svg * Update csc_assembly.md * Update pages/tool_assembly/csc_assembly.md Co-authored-by: Federico Bianchini <[email protected]> * Update pages/tool_assembly/csc_assembly.md ok! Co-authored-by: Federico Bianchini <[email protected]> * Update pages/tool_assembly/csc_assembly.md Co-authored-by: Federico Bianchini <[email protected]> * Update pages/tool_assembly/csc_assembly.md Co-authored-by: Federico Bianchini <[email protected]> * Update pages/tool_assembly/csc_assembly.md Co-authored-by: Federico Bianchini <[email protected]> * delete old image * Update news.yml Adding news about the refreshed CSC tool assembly page. --------- Co-authored-by: Nazeeefa <[email protected]> Co-authored-by: Federico Bianchini <[email protected]> Co-authored-by: bedroesb <[email protected]> * Adding a bibliography (#1434) * Adding bibliography * Update style_guide.md (#1435) --------- Co-authored-by: Korbinian Bösl <[email protected]> * Update nels_assembly.md (#1436) Using a country keyword for a tool assembly might create undesired results when courses for other independent national resources/tools are registered into TeSS. With the current suggestion some results of the query get lost, but maybe the annotations on TeSS should be improved (e.g. including explicitly NeLS as a keyword or similar). * Fairtracks assembly (#1419) * first draft of FAIRtracks tool assembly * adding EMBL-EBI to affiliations * Update no_resources.md * Update no_resources.md * Update fairtracks_assembly.md Added description metadata * Update fairtracks_assembly.md minor text improvements * adding link to training events on TeSS * Adding TeSS to the omnipy tool entry * revision from Sveinung * cross-referencing domain pages * revision of FAIRtracks assembly * replacing figure with new version based on feedback from the editors * Update news.yml news item on FAIRtracks tool assembly page * Update news.yml fixing wrong indentation * adding newline * Update news.yml updated date of news item --------- Co-authored-by: bedroesb <[email protected]> * Slight clarification (#1438) * Update fi_resources.md (#1439) * Update fi_resources.md Filling out "instance_of" field for FEGA Finland (instance of EGA) * Update fi_resources.md --------- Co-authored-by: Nazeeefa <[email protected]> * Update se_resources.md (#1430) * Update se_resources.md Review of all links and resources, and update where necessary * Update se_resources.md * Add FEGA-SE to metadata * Update tool/resource_list.yaml (#1440) Co-authored-by: bedroesb <[email protected]> * Update style_guide.md (#1442) * Update style_guide.md make bibliography as header * Add suggestions * Add full stop --------- Co-authored-by: Bert Droesbeke <[email protected]> * fixing display of instructions for creating a bibliography (#1446) * fixing display of instructions for creating a bibliography * Update pages/contribute/style_guide.md Co-authored-by: Bert Droesbeke <[email protected]> --------- Co-authored-by: Bert Droesbeke <[email protected]> * Update news.yml (#1449) added news about RIR * Update tool/resource_list.yaml (#1451) Co-authored-by: bedroesb <[email protected]> * Ml domain (#1443) * Adding md file for domain page on machine-learning * Adding domain page for ML to the sidebar * Changing authir name to match the one recorded in the contributors file * Update machine_learning.md * Update tool_and_resource_list.yml * Update machine_learning.md * Update references.bib * Update machine_learning.md * Fixing syntax for bibliography * minor polishing of bib file * Update machine_learning.md * Adding missing authors based on information from the draft Google document * Update machine_learning.md Minor text polishing and fixed indentation for nested lists. * Update tool_and_resource_list.yml * Update tool_and_resource_list.yml * updating page metadata * adding news item about ML domain page * minor tweaks of ML domain page * shortening title to avoid splitting in two lines * polishing list of tools * Update machine_learning.md * Update pages/your_domain/machine_learning.md * shortening long title, splitting wall of text in smaller paragraphs, adding again list that were lost in the conversion from Google document * polishing bib file * Update data_management.yml * Update news.yml * removed duplicate entry for Schema.org * removing license from tools and resources list * Update machine_learning.md --------- Co-authored-by: Stella Fragkouli <[email protected]> * improved bibtex entries for ML domain page (#1455) * Replaced broken links in National page of Estonia (#1452) * Update ee_resources.md, changed broken links * Update ee_resources.md * Update ee_resources.md * Update ee_resources.md * Update ee_resources.md minor fix --------- Co-authored-by: Nazeeefa <[email protected]> * Improved bibliography (#1448) * take away and * Update references.bib (#1454) --------- Co-authored-by: Korbinian Bösl <[email protected]> * Update news.yml (#1453) Added linked PR to new item * Update tool/resource_list.yaml (#1459) Co-authored-by: bedroesb <[email protected]> * Update email Bert Droesbeke * Update email Bert Droesbeke * Adding Daniel to past editors (#1460) * Take Daniel out of the CODEOWNERS * Update tool/resource_list.yaml (#1461) Co-authored-by: bedroesb <[email protected]> * Update tool/resource_list.yaml (#1462) Co-authored-by: bedroesb <[email protected]> * changing bibliography style to nature (#1456) * changing bibliography style to nature * custom nature bib tex style --------- Co-authored-by: bedroesb <[email protected]> * Adding metadata standards to the table of tools and resources (#1463) * Update existing_data.md (#1465) * Update no_resources.md (#1444) * Update no_resources.md * added VID resources * added normen chapter on privacy in research * Update no_resources.md * Update tool/resource_list.yaml (#1467) Co-authored-by: bedroesb <[email protected]> * Adding rss feed to track RDMkit news (#1466) * adding rss feed for news * fix xml * add ixon * Rounded video * Update tool/resource_list.yaml (#1468) Co-authored-by: bedroesb <[email protected]> * Update nl_resources.md (#1469) * Update nl_resources.md Added cBioPortal as a Dutch National Resource, requested by Lygature/EOSC4Cancer * Update nl_resources.md fixed the faulty URL for cBioPortal --------- Co-authored-by: Diana Pilvar <[email protected]> * Improve navigation by aligning the related pages with navigation tiles (#1366) * same graphics * fix type config * with icons * better theming * fix assembly * less css * variables * fix white * gray background * absolute path * relative link * variable for white * anchor fix * with shadow * smaller anchor * fix popping shadow * no shadow * smaller font * add new version * default shadow * different sizes * replace fix * replace fix * latest evrsion * primary color buttons * add news item * Update _data/news.yml Co-authored-by: Marina Popleteeva <[email protected]> * Update news.yml --------- Co-authored-by: Marina Popleteeva <[email protected]> * Adding Gil Poiares-Oliveira as an editorial member (#1471) * add @GilOliveira * Change Gil's email to BioData.pt --------- Co-authored-by: Gil Poiares-Oliveira <[email protected]> * Update tool_and_resource_list.yml Added the tools for the health data page. --------- Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: bedroesb <[email protected]> Co-authored-by: Bert Droesbeke <[email protected]> Co-authored-by: Siiri Fuchs <[email protected]> Co-authored-by: Nazeeefa <[email protected]> Co-authored-by: Federico Bianchini <[email protected]> Co-authored-by: bedroesb <[email protected]> Co-authored-by: Korbinian Bösl <[email protected]> Co-authored-by: Sveinung Gundersen <[email protected]> Co-authored-by: YvonneKallberg <[email protected]> Co-authored-by: floradanna <[email protected]> Co-authored-by: wittigue <[email protected]> Co-authored-by: Stella Fragkouli <[email protected]> Co-authored-by: Diana Pilvar <[email protected]> Co-authored-by: bedroesb <[email protected]> Co-authored-by: MijkeJetten <[email protected]> Co-authored-by: Marina Popleteeva <[email protected]> Co-authored-by: Gil Poiares-Oliveira <[email protected]> * take away search exclude * add to sidebar * add tools * Update pages/your_domain/health_data.md Co-authored-by: Federico Bianchini <[email protected]> * Update pages/your_domain/health_data.md Co-authored-by: Federico Bianchini <[email protected]> * Update pages/your_domain/health_data.md Co-authored-by: Federico Bianchini <[email protected]> * Update pages/your_domain/health_data.md Co-authored-by: Federico Bianchini <[email protected]> * Update pages/your_domain/health_data.md Co-authored-by: Federico Bianchini <[email protected]> * Update pages/your_domain/health_data.md Co-authored-by: Federico Bianchini <[email protected]> * Update CONTRIBUTORS.yaml (#1473) Added the contributors of the health data page * Update health_data.md fixing syntax error for tool * add tools * Update health_data.md Syntax error for tool fixed * take out duplicate contributors * contributor fix * bring back two palceholder contributos * add all tools * Update pages/your_domain/health_data.md Co-authored-by: Federico Bianchini <[email protected]> * Update pages/your_domain/health_data.md Co-authored-by: Federico Bianchini <[email protected]> * Update health_data.md modified ncbo bioportal with the too id * Update pages/your_domain/health_data.md Co-authored-by: Federico Bianchini <[email protected]> * Update CONTRIBUTORS.yaml * update titles --------- Co-authored-by: Laura Portell Silva <[email protected]> Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: bedroesb <[email protected]> Co-authored-by: Bert Droesbeke <[email protected]> Co-authored-by: Siiri Fuchs <[email protected]> Co-authored-by: Nazeeefa <[email protected]> Co-authored-by: Federico Bianchini <[email protected]> Co-authored-by: bedroesb <[email protected]> Co-authored-by: Korbinian Bösl <[email protected]> Co-authored-by: Sveinung Gundersen <[email protected]> Co-authored-by: YvonneKallberg <[email protected]> Co-authored-by: floradanna <[email protected]> Co-authored-by: wittigue <[email protected]> Co-authored-by: Stella Fragkouli <[email protected]> Co-authored-by: Diana Pilvar <[email protected]> Co-authored-by: bedroesb <[email protected]> Co-authored-by: MijkeJetten <[email protected]> Co-authored-by: Marina Popleteeva <[email protected]> Co-authored-by: Gil Poiares-Oliveira <[email protected]>
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Closes #1445