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Add simulist and superspreading
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jamesmbaazam committed Mar 8, 2024
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Expand Up @@ -124,6 +124,17 @@ network. The model is conceptually based on `{ringbp}`.
for handling, analysing, and visualizing transmission chains and contact-tracing
data/linelists.

* [simulist](https://epiverse-trace.github.io/simulist/): uses a branching
process model to simulate individual-level infectious disease outbreak data,
including line lists and contact tracing data. This package is part of the
Epiverse-TRACE Initiative.

* [superspreading](https://epiverse-trace.github.io/superspreading/): provides
a set of functions to estimate and understand individual-level variation in
transmission of infectious diseases from data on secondary cases. These are
useful for understanding the role of superspreading in the spread of infectious
diseases and for informing public health interventions.

* [earlyR](https://github.com/reconhub/earlyR): estimates the reproduction
number (R), in the early stages of an outbreak. The model requires a
specified serial interval distribution, characterised by the mean and
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