-
Notifications
You must be signed in to change notification settings - Fork 4
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Add test suite #93
Closed
Closed
Add test suite #93
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
creating base line of package
…nto dev-feature-strmodel
…rofoi into dev-feature-strmodel-miguel
* arreglo carpetas R/stanmodels * Funciones finales pendientes a modificación * Delete Funciones eliminadas.docx * Delete Explicación del código del paquete SEROFOI.docx * Documentación en inglés y español * Documentación lista * modify package structure * modify package structure * modify names and folder test * Creation of general modules and revision of functions * refactoring visualization functions and define some general pck structure * update readme file * update readme file * general settings * modify dependecies, document and name functions Co-authored-by: Zulma M. Cucunubá <[email protected]> Co-authored-by: megamezl <[email protected]> Co-authored-by: megamezl <[email protected]>
…ction separation by model.
… .RDS and updates test_visualization accordingly
* remove serodata .Rdata and .Rd files * remove R/serodata.R * doc: update functions documentation replacing for in examples * doc: update serofoi logo * doc: update README and vignettes This commit changes the removed preloaded dataset `serodata` for the identical `chagas2012`. * fix: minor correction to test_modelling
This PR should be merged after #83 . |
Simplify fit_seromodel() output and related refactorizations
…#59) * fix: add exception to function plot_foi() to plot a FOI trend with different length along with the data for the case when their sizes don't coincide * clean test_visualisation * feature: add three functions to simulate datasets. get_sim_counts() generates a list with simulated counts by age following a binomial distribution. generate_sim_data() uses the counts generated by get_sim_counts() to create a dataframe with the necessary structure to use other functions of the package. group_sim_data() serves to group the previously generated dataset by age group; right now it groups the data by periods of 5 years. * add test_simulate_data to test the data simulation functions in the seroprevalence_data module
2e066b1
to
8e1a7f8
Compare
Closed
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
This PR will:
It is a work in progress and will help improve the coverage of the package.
I am looping in @joshwlambert as we are working on this together.