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R-CMD-check

R-CMD-check #270

Triggered via schedule December 13, 2024 08:03
Status Failure
Total duration 31m 43s
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R-CMD-check.yaml

on: schedule
Matrix: R-CMD-check
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2 errors and 36 warnings
ubuntu-latest ( - bioconductor/bioconductor_docker:devel)
Process completed with exit code 1.
macOS-latest (devel - )
No such keg: /opt/homebrew/Cellar/[email protected]
macOS-latest (devel - )
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v1. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
ubuntu-latest (devel - )
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v1. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
ubuntu-latest ( - bioconductor/bioconductor_docker:devel)
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v1. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
windows-latest (devel - )
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v1. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
windows-latest (devel - )
unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.5:
windows-latest (devel - )
unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.5:
windows-latest (devel - )
unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.5:
windows-latest (devel - )
unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.5:
ubuntu-latest ( - bioconductor/bioconductor_docker:devel)
No files were found with the provided path: check. No artifacts will be uploaded.
ubuntu-latest ( - bioconductor/bioconductor_docker:devel)
No files were found with the provided path: check. No artifacts will be uploaded.
macOS-latest (devel - )
pkgconf 2.3.0_1 is already installed and up-to-date. To reinstall 2.3.0_1, run: brew reinstall pkgconf
macOS-latest (devel - )
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
macOS-latest (devel - )
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (devel - )
unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (devel - )
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (devel - )
unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (devel - )
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (devel - )
unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (devel - )
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (devel - )
unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (devel - )
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (devel - )
Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
macOS-latest (devel - )
Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
macOS-latest (devel - )
Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
macOS-latest (devel - )
Unused dummy argument ‘timed’ at (1) [-Wunused-dummy-argument]
macOS-latest (devel - )
Unused dummy argument ‘timed’ at (1) [-Wunused-dummy-argument]
macOS-latest (devel - )
Unused dummy argument ‘timed’ at (1) [-Wunused-dummy-argument]
macOS-latest (devel - )
Unused dummy argument ‘timed’ at (1) [-Wunused-dummy-argument]
macOS-latest (devel - )
Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion]
macOS-latest (devel - )
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (devel - )
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (devel - )
cairo 1.18.2 is already installed and up-to-date. To reinstall 1.18.2, run: brew reinstall cairo
macOS-latest (devel - )
macOS's Gatekeeper has been disabled for this Cask
macOS-latest (devel - )
harfbuzz 10.1.0 is already installed and up-to-date. To reinstall 10.1.0, run: brew reinstall harfbuzz
macOS-latest (devel - )
fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi
ubuntu-latest (devel - )
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636