Releases: feldroop/floxer
Releases · feldroop/floxer
0.2.0
Release Notes
Description
Many features were added to allow the practical use of floxer
. This includes more alignments due to reverse complementing of reads, sam-formatted output files and many robustness improvents.
Feature list
- various robustness improvements around invalid/odd inputs
- add error probability command line option
- improve help page
- sam-formatted file output
- nicer diagnostic output
- multithreading
- reverse complement alignments
Upcoming features
- Performance improvements
- Large indel, structural variant handling
- MAPQ scores
Version 0.1.0
Release notes
Description
First, barely functional version of floxer
.
It now prints the desired exact alignment results to the command line (according to its definition of exactness). It works correctly, at least for one simple test.
Upcoming features and improvements
- write output to .sam/.bam files instead of printing
- command line options for real use cases
- robustness improvements for queries of different lengths to allow benchmarking real usecases
- test benchmark to verify the exactness of the tool
- first performance benchmark against
minimap
to see what we're dealing with