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GenSketch

This project is on indefinite hiatus due to conflict of interest with my current employer. GenSketch is a genomics data viewer heavily inspired by IGV. As compared to existing viewers, GenSketch aims to provide more powerful interactive editing functionality.

Planned Features

  • Drag and drop reads to different genomic locations to see how they align.
  • Cutting/splicing/inverting read sequences (e.g to visualize structural rearrangments).
  • Manually arrange specific reads in a sketchpad track to produce figures for publication.

Roadmap

0.1.0

  • Basic SAM/BAM visualization

0.2.0

  • Initial sketchpad functionality with support for dragging and dropping reads

0.3.0

  • Additional sketchpad functionality (exclude/cut/copy)