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Writing
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Writing
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Achievement: Pull Sharkx2Achievement: YOLOAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pull Sharkx2Achievement: YOLOAchievement: Arctic Code Vault Contributor

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ferygood/README.md

Hi there 👋

I'm Yao-Chung, a PhD student at Nowick Lab, at Freie Universität Berlin.

My research focuses on transcription factors in primates, Bioinformatics, and Machine Learning.

Publications:

  1. TEKRABber: analyzing genes and transposable elements across species. Bioconductor package
  2. Regulatory networks of KRAB zinc finger genes and transposable elements changed during human brain evolution and disease bioRxiv

📫 [email protected]

Github Stats
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  1. TEKRABber TEKRABber Public

    An R Bioinformatic package for DE and correlation analysis comparing between species.

    R 3

  2. preTEKRABber_pipe preTEKRABber_pipe Public

    A snakemake pipeline for RNA-seq analysis, especially for preparing dataset for using TEKRABber software.

    Python 1

  3. antifungal-linguist antifungal-linguist Public

    A language model developed for antifungal medicine discovery. The architecture is a pre-trained T5 base model and fine-tuned using step-by-step distilling.

    Jupyter Notebook 1 1

  4. nf-STAR-TEtranscript nf-STAR-TEtranscript Public

    This project aims to develop an nf-core nextflow pipeline to conduct genes and transposable elements from RNA-seq data

    Nextflow 1 1

  5. shortURL shortURL Public

    An api that can shorten long url for users

    Python

  6. twice twice Public

    addin functions for analyzing transposable elements/ transcription factors data

    R