Merge pull request #937 from fls-bioinformatics-core/qc-utils-update-…

…conda-deps qc/utils: update the conda dependencies in 'report_qc' function
fls-bioinformatics-core · Jan 19, 2024 · 2f8b107 · 2f8b107
2 parents a7c1dfe + b7c3b4a
commit 2f8b107
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/auto_process_ngs/qc/utils.py b/auto_process_ngs/qc/utils.py
@@ -205,7 +205,8 @@ def report_qc(project,qc_dir=None,fastq_dir=None,qc_protocol=None,
         # Get environment for QC reporting
         report_qc_conda_pkgs = ("multiqc=1.8",
                                 "pillow",
-                                "python=3.8")
+                                "python=3.8",
+                                "numpy=1.20.3")
         env_name = make_conda_env_name(*report_qc_conda_pkgs)
         try:
             conda.create_env(env_name,*report_qc_conda_pkgs)