Build testpackage definition automatically from directories.

testpackage/small_test_definitions.sh

@@ -18,138 +18,28 @@ run_dir="run"
 test_dir="tests"
 
 # choose tests to run
-run_tests=( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 17 18 19)
+tests=()
 
-# acceleration test
-test_name[1]="acctest_2_maxw_500k_100k_20kms_10deg"
-comparison_vlsv[1]="fullf.0000001.vlsv"
-comparison_phiprof[1]="phiprof_0.txt"
-variable_names[1]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v proton"
-variable_components[1]="0 0 1 2"
-single_cell[1]=1
+# If no tests are specified, run all tests/ subdirectories.
+if [ "${#tests[@]}" -eq "0" ]; then
+   tests=($(/bin/ls -d tests/*))
+   echo "No run_tests list specified, using all ${#tests[@]} subdirectories of tests/"
+fi;
 
-# acceleration test w/ substepping
-test_name[2]="acctest_3_substeps"
-comparison_vlsv[2]="fullf.0000001.vlsv"
-comparison_phiprof[2]="phiprof_0.txt"
-variable_names[2]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v proton"
-variable_components[2]="0 0 1 2"
-single_cell[2]=1
 
-# translation test
-test_name[3]="transtest_2_maxw_500k_100k_20kms_20x20"
-comparison_vlsv[3]="fullf.0000001.vlsv"
-comparison_phiprof[3]="phiprof_0.txt"
-variable_names[3]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v proton"
-variable_components[3]="0 0 1 2"
+# Iterate through the specified tests and add them to the table
+num_tests=0
+for i in ${tests[@]}; do
+   if [ -f $i/test_spec.sh ]; then
+      test_name[$num_tests]=$i
+      . $i/test_spec.sh
+      num_tests=$((num_tests + 1))
+   else 
+      echo "Warning: test $i does not have a test_spec.sh."
+   fi
+done
 
-test_name[4]="acctest_4_helium"
-comparison_vlsv[4]="fullf.0000001.vlsv"
-comparison_phiprof[4]="phiprof_0.txt"
-variable_names[4]="helium/vg_rho helium/vg_v helium/vg_v helium/vg_v"
-variable_components[4]="0 0 1 2"
-single_cell[4]=1
+run_tests=($(seq 0 $((num_tests-1))))
 
-# Gyration test with protons and antiprotons
-test_name[5]="acctest_5_proton_antiproton"
-comparison_vlsv[5]="fullf.0000001.vlsv"
-comparison_phiprof[5]="phiprof_0.txt"
-variable_names[5]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v proton"
-variable_components[5]="0 0 1 2"
-single_cell[5]=1
+echo $num_tests test to run in total.
 
-# Restart tests. Writing and reading
-test_name[6]="restart_write"
-comparison_vlsv[6]="bulk.0000001.vlsv"
-comparison_phiprof[6]="phiprof_0.txt"
-variable_names[6]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e"
-variable_components[6]="0 0 1 2 0 1 2 0 1 2"
-test_name[7]="restart_read"
-comparison_vlsv[7]="initial-grid.0000000.vlsv"
-comparison_phiprof[7]="phiprof_0.txt"
-variable_names[7]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e"
-variable_components[7]="0 0 1 2 0 1 2 0 1 2"
-
-#Very small ecliptic magnetosphere, no subcycling in ACC or FS
-test_name[8]="Magnetosphere_small"
-comparison_vlsv[8]="bulk.0000001.vlsv"
-comparison_phiprof[8]="phiprof_0.txt"
-variable_names[8]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e proton"
-variable_components[8]="0 0 1 2 0 1 2 0 1 2"
-
-#Very small polar magnetosphere, with subcycling in ACC or FS
-test_name[9]="Magnetosphere_polar_small"
-comparison_vlsv[9]="bulk.0000001.vlsv"
-comparison_phiprof[9]="phiprof_0.txt"
-variable_names[9]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e proton/vg_v_nonthermal proton/vg_v_nonthermal proton/vg_v_nonthermal proton/vg_ptensor_nonthermal_diagonal proton/vg_ptensor_nonthermal_diagonal proton/vg_ptensor_nonthermal_diagonal proton"
-variable_components[9]="0 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2"
-
-# Field solver test
-test_name[10]="test_fp_fsolver_only_3D"
-comparison_vlsv[10]="fullf.0000001.vlsv"
-comparison_phiprof[10]="phiprof_0.txt"
-variable_names[10]="fg_b fg_b fg_b fg_e fg_e fg_e"
-variable_components[10]="0 1 2 0 1 2"
-
-# Field solver test w/ subcycles
-test_name[11]="test_fp_substeps"
-comparison_vlsv[11]="fullf.0000001.vlsv"
-comparison_phiprof[11]="phiprof_0.txt"
-variable_names[11]="fg_b fg_b fg_b fg_e fg_e fg_e"
-variable_components[11]="0 1 2 0 1 2"
-
-# Flowthrough tests
-test_name[12]="Flowthrough_trans_periodic"
-comparison_vlsv[12]="bulk.0000001.vlsv"
-comparison_phiprof[12]="phiprof_0.txt"
-variable_names[12]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e"
-variable_components[12]="0 0 1 2 0 1 2 0 1 2"
-
-test_name[13]="Flowthrough_x_inflow_y_outflow"
-comparison_vlsv[13]="bulk.0000001.vlsv"
-comparison_phiprof[13]="phiprof_0.txt"
-variable_names[13]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e"
-variable_components[13]="0 0 1 2 0 1 2 0 1 2"
-
-test_name[14]="Flowthrough_x_inflow_y_outflow_acc"
-comparison_vlsv[14]="bulk.0000001.vlsv"
-comparison_phiprof[14]="phiprof_0.txt"
-variable_names[14]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e"
-variable_components[14]="0 0 1 2 0 1 2 0 1 2"
-
-# Self-consistent wave generation test
-test_name[15]="Selfgen_Waves_Periodic"
-comparison_vlsv[15]="fullf.0000001.vlsv"
-comparison_phiprof[15]="phiprof_0.txt"
-variable_names[15]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e proton"
-variable_components[15]="0 0 1 2 0 1 2 0 1 2"
-
-## Velocity AMR tests
-# translation test
-test_name[16]="transtest_amr"
-comparison_vlsv[16]="fullf.0000001.vlsv"
-comparison_phiprof[16]="phiprof_0.txt"
-variable_names[16]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v proton"
-variable_components[16]="0 0 1 2"
-
-## Spatial AMR tests
-# Flowthrough test
-test_name[17]="Flowthrough_amr"
-comparison_vlsv[17]="bulk.0000001.vlsv"
-comparison_phiprof[17]="phiprof_0.txt"
-variable_names[17]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e"
-variable_components[17]="0 0 1 2 0 1 2 0 1 2"
-
-# Magnetosphere 3D
-test_name[18]="Magnetosphere_3D_small"
-comparison_vlsv[18]="bulk.0000001.vlsv"
-comparison_phiprof[18]="phiprof_0.txt"
-variable_names[18]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e"
-variable_components[18]="0 0 1 2 0 1 2 0 1 2"
-
-# Ionosphere 3D
-test_name[19]="Ionosphere_small"
-comparison_vlsv[19]="bulk.0000001.vlsv"
-comparison_phiprof[19]="phiprof_0.txt"
-variable_names[19]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e ig_upmappedarea ig_fac ig_rhon ig_potential"
-variable_components[19]="0 0 1 2 0 1 2 0 1 2 0 0 0 0"

testpackage/tests/Flowthrough_amr/test_spec.sh

@@ -0,0 +1,5 @@
+comparison_vlsv[$num_tests]="bulk.0000001.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e"
+variable_components[$num_tests]="0 0 1 2 0 1 2 0 1 2"
+

testpackage/tests/Flowthrough_trans_periodic/test_spec.sh

@@ -0,0 +1,4 @@
+comparison_vlsv[$num_tests]="bulk.0000001.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e"
+variable_components[$num_tests]="0 0 1 2 0 1 2 0 1 2"

testpackage/tests/Flowthrough_x_inflow_y_outflow/test_spec.sh

@@ -0,0 +1,4 @@
+comparison_vlsv[$num_tests]="bulk.0000001.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e"
+variable_components[$num_tests]="0 0 1 2 0 1 2 0 1 2"

testpackage/tests/Flowthrough_x_inflow_y_outflow_acc/test_spec.sh

@@ -0,0 +1,4 @@
+comparison_vlsv[$num_tests]="bulk.0000001.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e"
+variable_components[$num_tests]="0 0 1 2 0 1 2 0 1 2"

testpackage/tests/Ionosphere_small/test_spec.sh

@@ -0,0 +1,4 @@
+comparison_vlsv[$num_tests]="bulk.0000001.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e ig_upmappedarea ig_fac ig_rhon ig_potential"
+variable_components[$num_tests]="0 0 1 2 0 1 2 0 1 2 0 0 0 0"

testpackage/tests/Magnetosphere_3D_small/test_spec.sh

@@ -0,0 +1,4 @@
+comparison_vlsv[$num_tests]="bulk.0000001.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e"
+variable_components[$num_tests]="0 0 1 2 0 1 2 0 1 2"

testpackage/tests/Magnetosphere_polar_small/test_spec.sh

@@ -0,0 +1,4 @@
+comparison_vlsv[$num_tests]="bulk.0000001.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e proton/vg_v_nonthermal proton/vg_v_nonthermal proton/vg_v_nonthermal proton/vg_ptensor_nonthermal_diagonal proton/vg_ptensor_nonthermal_diagonal proton/vg_ptensor_nonthermal_diagonal proton"
+variable_components[$num_tests]="0 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2"

testpackage/tests/Magnetosphere_small/test_spec.sh

@@ -0,0 +1,4 @@
+comparison_vlsv[$num_tests]="bulk.0000001.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e proton"
+variable_components[$num_tests]="0 0 1 2 0 1 2 0 1 2"

testpackage/tests/Selfgen_Waves_Periodic/test_spec.sh

@@ -0,0 +1,4 @@
+comparison_vlsv[$num_tests]="fullf.0000001.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e proton"
+variable_components[$num_tests]="0 0 1 2 0 1 2 0 1 2"

testpackage/tests/acctest_2_maxw_500k_100k_20kms_10deg/test_spec.sh

@@ -0,0 +1,6 @@
+# acceleration test
+comparison_vlsv[$num_tests]="fullf.0000001.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v proton"
+variable_components[$num_tests]="0 0 1 2"
+single_cell[$num_tests]=1

testpackage/tests/acctest_3_substeps/test_spec.sh

@@ -0,0 +1,5 @@
+comparison_vlsv[$num_tests]="fullf.0000001.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v proton"
+variable_components[$num_tests]="0 0 1 2"
+single_cell[$num_tests]=1

testpackage/tests/acctest_4_helium/test_spec.sh

@@ -0,0 +1,5 @@
+comparison_vlsv[$num_tests]="fullf.0000001.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="helium/vg_rho helium/vg_v helium/vg_v helium/vg_v"
+variable_components[$num_tests]="0 0 1 2"
+single_cell[$num_tests]=1

testpackage/tests/acctest_5_proton_antiproton/test_spec.sh

@@ -0,0 +1,5 @@
+comparison_vlsv[$num_tests]="fullf.0000001.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v proton"
+variable_components[$num_tests]="0 0 1 2"
+single_cell[$num_tests]=1

testpackage/tests/restart_read/test_spec.sh

@@ -0,0 +1,4 @@
+comparison_vlsv[$num_tests]="initial-grid.0000000.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e"
+variable_components[$num_tests]="0 0 1 2 0 1 2 0 1 2"

testpackage/tests/restart_write/test_spec.sh

@@ -0,0 +1,4 @@
+comparison_vlsv[$num_tests]="bulk.0000001.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v fg_b fg_b fg_b fg_e fg_e fg_e"
+variable_components[$num_tests]="0 0 1 2 0 1 2 0 1 2"

testpackage/tests/test_fp_fsolver_only_3D/test_spec.sh

@@ -0,0 +1,4 @@
+comparison_vlsv[$num_tests]="fullf.0000001.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="fg_b fg_b fg_b fg_e fg_e fg_e"
+variable_components[$num_tests]="0 1 2 0 1 2"

testpackage/tests/test_fp_substeps/test_spec.sh

@@ -0,0 +1,4 @@
+comparison_vlsv[$num_tests]="fullf.0000001.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="fg_b fg_b fg_b fg_e fg_e fg_e"
+variable_components[$num_tests]="0 1 2 0 1 2"

testpackage/tests/transtest_2_maxw_500k_100k_20kms_20x20/test_spec.sh

@@ -0,0 +1,4 @@
+comparison_vlsv[$num_tests]="fullf.0000001.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v proton"
+variable_components[$num_tests]="0 0 1 2"

testpackage/tests/transtest_amr/test_spec.sh

@@ -0,0 +1,4 @@
+comparison_vlsv[$num_tests]="fullf.0000001.vlsv"
+comparison_phiprof[$num_tests]="phiprof_0.txt"
+variable_names[$num_tests]="proton/vg_rho proton/vg_v proton/vg_v proton/vg_v proton"
+variable_components[$num_tests]="0 0 1 2"