Add manifest-building GHA #2
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Manifest build (external packages) | |
| on: | |
| push: | |
| branches: ["main"] | |
| pull_request: | |
| branches: ["main"] | |
| workflow_dispatch: | |
| schedule: | |
| - cron: "0 23 * * 2,4" | |
| jobs: | |
| build-manifest: | |
| runs-on: ubuntu-22.04 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| external_github_repository: [skip] | |
| cmd_install: [skip] | |
| cmd_create_manifest: [skip] | |
| manifest_path: [skip] | |
| include: | |
| - external_github_repository: fmi-basel/gliberal-scMultipleX | |
| cmd_install: 'python -m pip install -e .[fractal-tasks]' | |
| cmd_create_manifest: 'python src/scmultiplex/dev/create_manifest.py' | |
| manifest_path: src/scmultiplex/__FRACTAL_MANIFEST__.json | |
| - external_github_repository: jluethi/fractal-helper-tasks | |
| cmd_install: 'python -m pip install -e .' | |
| cmd_create_manifest: 'python src/fractal_helper_tasks/dev/create_manifest.py' | |
| manifest_path: src/fractal_helper_tasks/__FRACTAL_MANIFEST__.json | |
| - external_github_repository: Apricot-Therapeutics/APx_fractal_task_collection | |
| cmd_install: 'python -m pip install -e .' | |
| cmd_create_manifest: 'python src/apx_fractal_task_collection/dev/update_manifest.py' | |
| manifest_path: src/apx_fractal_task_collection/__FRACTAL_MANIFEST__.json | |
| exclude: | |
| - external_github_repository: skip | |
| cmd_install: skip | |
| cmd_create_manifest: skip | |
| manifest_path: skip | |
| steps: | |
| - name: Print matrix-element information | |
| run: | | |
| echo 'repo: ${{ matrix.external_github_repository }}' | | |
| echo 'cmd_install: ${{ matrix.cmd_install }}' | | |
| echo 'cmd_create_manifest: ${{ matrix.cmd_create_manifest }}' | | |
| echo 'manifest_path: ${{ matrix.manifest_path }}' | |
| - name: Get package source code | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: ${{ matrix.external_github_repository }} | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.10' | |
| cache: 'pip' | |
| - name: Install package | |
| run: ${{ matrix.cmd_install }} | |
| - name: Create manifest | |
| run: ${{ matrix.cmd_create_manifest }} | |
| - name: Run git diff for manifest | |
| run: git diff ${{ matrix.manifest_path }} | |
| - name: Check repo status | |
| run: if [[ -z $(git status -s) ]]; then echo "Clean status"; else echo "Dirty status"; git status; exit 1; fi |