fix bug in percentile

fractal-analytics-platform · Nov 4, 2024 · aa4dd23 · aa4dd23
1 parent 3e446b3
commit aa4dd23
Showing 1 changed file with 7 additions and 2 deletions.
diff --git a/src/ngio/core/ngff_image.py b/src/ngio/core/ngff_image.py
@@ -94,11 +94,16 @@ def _update_omero_window(
         max_dtype = np.iinfo(image.on_disk_array.dtype).max
 
         start = da.percentile(
-            lowest_res_image.on_disk_dask_array, min_percentile, method="nearest"
+            lowest_res_image.on_disk_dask_array.ravel(),
+            min_percentile,
+            method="nearest",
         ).compute()
         end = da.percentile(
-            lowest_res_image.on_disk_dask_array, max_percentile, method="nearest"
+            lowest_res_image.on_disk_dask_array.ravel(),
+            max_percentile,
+            method="nearest",
         ).compute()
+        print(f"Setting window to {start} - {end}")
 
         if meta.omero is None:
             raise ValueError("OMERO metadata is not present in the image.")