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[24.1] Fix extract workflow from history when implicit collection has no jobs #18661

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mvdbeek
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@mvdbeek mvdbeek commented Aug 7, 2024

Fixes #18484.

It's not ideal on the one hand, but better to have a workflow with gaps
than an internal server error IMO. We do the same for datasets in some
non-terminal states.

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  • I've included appropriate automated tests.
  • This is a refactoring of components with existing test coverage.
  • Instructions for manual testing are as follows:
    1. [add testing steps and prerequisites here if you didn't write automated tests covering all your changes]

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  • I agree to license these and all my past contributions to the core galaxy codebase under the MIT license.

Fixes galaxyproject#18484.

It's not ideal on the one hand, but better to have a workflow with gaps
than an internal server error IMO. We do the same for datasets in some
non-terminal states.
@galaxyproject-sentryintegration

🔍 Existing Issues For Review

Your pull request is modifying functions with the following pre-existing issues:

📄 File: lib/galaxy/workflow/extract.py

Function Unhandled Issue
__summarize_dataset_collection IndexError: list index out of range /workflow/bui...
Event Count: 2

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@github-actions github-actions bot added this to the 24.1 milestone Aug 7, 2024
@mvdbeek
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mvdbeek commented Aug 7, 2024

That's a lot of flaky tests, but I think they're all unrelated 😓

@mvdbeek mvdbeek merged commit cf211c1 into galaxyproject:release_24.1 Aug 7, 2024
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2 participants