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Update .travis.yml
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bgruening authored and mvdbeek committed Sep 15, 2016
1 parent 739dcf1 commit 5fa2607
Showing 1 changed file with 8 additions and 6 deletions.
14 changes: 8 additions & 6 deletions .travis.yml
Original file line number Diff line number Diff line change
Expand Up @@ -14,12 +14,14 @@ before_install:
- export PLANEMO_CONDA_PREFIX="$HOME/conda"

install:
# html5lib (planemo dep) requires setuptools >= 18.5
- pip install -q flake8 planemo
- planemo conda_init
- export PATH="$PLANEMO_CONDA_PREFIX/bin:$PATH"
- conda create -y -q -c bioconda --name iuc_conda samtools=0.1.19 bcftools
- . activate iuc_conda
- pip install --upgrade setuptools
- pip install -q click==5.1
- pip install -q planemo
- planemo conda_init --conda_prefix $CONDA_PREFIX
- export PATH=$CONDA_PREFIX/bin:$PATH
- conda install -y -q conda=3.19.3
- conda create -y -q -c bioconda --name iuc_conda numpy==1.9.2 samtools bcftools
- source activate iuc_conda
- planemo --version
- conda --version
- echo $TRAVIS_COMMIT_RANGE
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