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plasflow 1.1.0 tools fails planemo test #3711
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Should be fixed for now |
Hi,
Recently, there is a sra_tools v3 update on galaxy repo from iuc, which requires galaxy version +22.01. Currently, our Galaxytrakr server runs on 21.09. Can you please let us know if there is a way, we can update sra_tools on galaxy version 21.09? This will be helpful until we make our next galaxy version upgrade.
Thanks,
Jayanthi
… |
@JayanthiGangiredla all ideas that come to my mind seem more complicated than an update. The question seems not related to this issue. It would have been better to open a new issue. |
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How to reproduce:
planemo test plasflow.xml
This is with plasflow installed from bioconda (where the bioconda recipe is from bioconda/bioconda-recipes#10326). This seems to be noted as a problem upstream - see WIP PR bioconda/bioconda-recipes#27766 from @bernt-matthias. I'm opening this issue though to note that this tool is, for now, broken. Thanks to @JayanthiGangiredla for noting this.
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