Skip to content

Commit

Permalink
Update tools.yml with recetox and ms tools
Browse files Browse the repository at this point in the history
  • Loading branch information
hechth authored Oct 5, 2023
1 parent 5ca08b7 commit 230416d
Showing 1 changed file with 14 additions and 0 deletions.
14 changes: 14 additions & 0 deletions tools.yml
Original file line number Diff line number Diff line change
Expand Up @@ -2359,6 +2359,10 @@ tools:
mem: 32
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_retcor/abims_xcms_retcor/.*:
mem: 32
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_group/abims_xcms_group/.*:
mem: 32
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_merge/abims_xcms_merge/.*:
mem: 32
toolshed.g2.bx.psu.edu/repos/lparsons/cutadapt/cutadapt/.*:
cores: 5
toolshed.g2.bx.psu.edu/repos/lparsons/htseq_count/htseq_count/.*:
Expand Down Expand Up @@ -2402,8 +2406,18 @@ tools:
mem: 12
env:
_JAVA_OPTIONS: -Xmx{int(mem)}G -Xms1G
toolshed.g2.bx.psu.edu/repos/recetox/ramclustr/ramclustr/.*:
cores: 4
toolshed.g2.bx.psu.edu/repos/recetox/recetox_aplcms_align_features/recetox_aplcms_align_features/.*:
cores: 4
toolshed.g2.bx.psu.edu/repos/recetox/recetox_aplcms_compute_clusters/recetox_aplcms_compute_clusters/.*:
mem: 16
toolshed.g2.bx.psu.edu/repos/recetox/recetox_aplcms_generate_feature_table/recetox_aplcms_generate_feature_table/.*:
mem: 16
toolshed.g2.bx.psu.edu/repos/recetox/recetox_aplcms_recover_weaker_signals/recetox_aplcms_recover_weaker_signals/.*:
mem: 16
toolshed.g2.bx.psu.edu/repos/recetox/recetox_aplcms_remove_noise/recetox_aplcms_remove_noise/.*:
mem: 16
toolshed.g2.bx.psu.edu/repos/rnateam/blockbuster/blockbuster/.*:
mem: 64
toolshed.g2.bx.psu.edu/repos/rnateam/blockclust/blockclust/.*:
Expand Down

0 comments on commit 230416d

Please sign in to comment.