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|---|---|---|
|
|
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| <meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"> | ||
| <title>Galaxy Training!</title> | ||
|
|
||
| <!-- JavaScript Error Monitoring, and performance tracking. --> | ||
| <meta name="google-site-verification" content="9mOXn2JL833-i7-aioCCEuIdG4_tb6qjwUozB5GJnPQ" /> | ||
|
|
||
| <!-- JavaScript Error Monitoring, and performance tracking. --> | ||
| <script | ||
| src="https://browser.sentry-cdn.com/7.52.1/bundle.tracing.min.js" | ||
| integrity="sha384-muuFXKS3752PNA4rPm9Uq6BLvOfV4CXyr9MHDBPvozOJJUWLKkogEFWOIRoVps43" | ||
|
|
@@ -17,7 +19,7 @@ | |
| console.log("Sentry: opt-in"); | ||
| Sentry.init({ | ||
| dsn: "https://[email protected]/10", | ||
| release: "galaxy-training-network@58d2ae7147cfaf6693ceadb52be3585e13da655b", | ||
| release: "galaxy-training-network@3a5225dd8dad00c5479fa12f0a4cfb7d88b0f9d6", | ||
| integrations: [new Sentry.BrowserTracing(), new Sentry.Replay()], | ||
| sampleRate: 0.1, | ||
| tracesSampleRate: 0.1, | ||
|
|
@@ -55,8 +57,8 @@ | |
| <link rel="preload" href="/training-material/assets/fonts/AtkinsonHyperlegible/Atkinson-Hyperlegible-Italic-102a.woff2" as="font" type="font/woff2" crossorigin> | ||
| <link rel="preload" href="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.1/MathJax.js?config=TeX-AMS-MML_HTMLorMML" as="script" crossorigin> | ||
| <link rel="preload" href="/training-material/assets/css/main.css?v=3" as="style"> | ||
| <link rel='preload' href='/training-material/assets/js/bundle.theme.js?v=1698940402' as='script'> | ||
| <link rel='preload' href='/training-material/assets/js/bundle.main.js?v=1698940402' as='script'> | ||
| <link rel='preload' href='/training-material/assets/js/bundle.theme.js?v=1698946796' as='script'> | ||
| <link rel='preload' href='/training-material/assets/js/bundle.main.js?v=1698946796' as='script'> | ||
| <link rel="stylesheet" href="/training-material/assets/css/main.css?v=3"> | ||
| <link rel="manifest" href="/training-material/manifest.json"> | ||
| <meta name="theme-color" content="#2c3143"/> | ||
|
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@@ -82,7 +84,7 @@ | |
|
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||
| </head> | ||
| <body data-spy="scroll" data-target="#toc" data-brightness="auto" data-contrast="auto"> | ||
| <script src='/training-material/assets/js/bundle.theme.js?v=1698940402'></script> | ||
| <script src='/training-material/assets/js/bundle.theme.js?v=1698946796'></script> | ||
| <header> | ||
| <nav class="navbar navbar-expand-md navbar-dark" aria-label="Site Navigation"> | ||
| <div class="container"> | ||
|
|
@@ -233,7 +235,7 @@ <h2 id="we-cant-seem-to-find-the-page-youre-looking-for">We can’t seem to find | |
| The GTN infrastructure is licensed under <a rel="license" href="https://github.com/galaxyproject/training-material/blob/main/LICENSE.md">MIT</a> | ||
| </p> | ||
| <p> | ||
| Revision <a href="https://github.com/galaxyproject/training-material/commit/58d2ae7147cfaf6693ceadb52be3585e13da655b">58d2ae7</a>, built with Jekyll (4.3.2 | production) | ||
| Revision <a href="https://github.com/galaxyproject/training-material/commit/3a5225dd8dad00c5479fa12f0a4cfb7d88b0f9d6">3a5225d</a>, built with Jekyll (4.3.2 | production) | ||
| </p> | ||
| </div> | ||
| <div class="col-sm-6" style="text-align: right"> | ||
|
|
@@ -257,7 +259,7 @@ <h2 id="we-cant-seem-to-find-the-page-youre-looking-for">We can’t seem to find | |
| </footer> | ||
|
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|
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| <script src='/training-material/assets/js/bundle.main.js?v=1698940402'></script> | ||
| <script src='/training-material/assets/js/bundle.main.js?v=1698946796'></script> | ||
| <script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.1/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script> | ||
| </body> | ||
| </html> | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,214 @@ | ||
| # List of contributors | ||
| # | ||
| # reference maintainers/contributors by their id in tutorial metadata files | ||
| # | ||
| # valid tags: | ||
| # name, email, linkedin, twitter, gitter, orcid, bio, joined, url, | ||
| # funder, funding_id, funding_system, funding_statement | ||
| # | ||
| # collection names should be equal to github username, if not, add github: false tag | ||
| --- | ||
|
|
||
| # funder1: | ||
| # name: Funder A | ||
| # joined: 2020-06 | ||
| # url: "https://example.com" | ||
| # funder: true | ||
| # funding_id: 2020-1-NL01-KA203-064717 | ||
| # funding_system: erasmusplus | ||
| # funding_statement: "This project is funded with the support of .." | ||
|
|
||
| # our real funders <3 | ||
|
|
||
| gallantries: | ||
| name: "Gallantries: Bridging Training Communities in Life Science, Environment and Health" | ||
| short_name: "Gallantries" | ||
| start_date: "2020-09-01" | ||
| end_date: "2023-09-30" | ||
| joined: 2020-09 | ||
| avatar: "https://gallantries.github.io/assets/images/gallantries-logo.png" | ||
| github: false | ||
| funder: true | ||
| url: "https://www.erasmusplus.nl" | ||
| funder_name: Erasmus+ Programme | ||
| funding_id: 2020-1-NL01-KA203-064717 | ||
| funding_system: erasmusplus | ||
| funding_statement: | | ||
| This project ([`2020-1-NL01-KA203-064717`](https://ec.europa.eu/programmes/erasmus-plus/projects/eplus-project-details/#project/2020-1-NL01-KA203-064717)) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics. | ||
|  | ||
|  | ||
| CINECA-Project: | ||
| name: Common Infrastructure for National Cohorts in Europe, Canada, and Africa | ||
| short_name: "CINECA" | ||
| joined: 2023-03 | ||
| funder: true | ||
| funding_id: "825775" | ||
| funding_system: cordis | ||
| url: https://www.cineca-project.eu | ||
|
|
||
| epsrc-training-grant: | ||
| name: EPSRC Training Grant DTP 2020-2021 Open University | ||
| short_name: "EPSRC/OU" | ||
| github: false | ||
| joined: 2022-09 | ||
| funder: true | ||
| funding_statement: The research internship was supported through EPSRC Training Grant DTP 2020-2021 Open University | ||
| url: "https://www.open.ac.uk/" | ||
|
|
||
| eosc-life: | ||
| name: EOSC-Life | ||
| github: false | ||
| joined: 2023-04 | ||
| avatar: "https://www.eosc-life.eu/wp-content/themes/eosc-life-v2/assets/images/eosclogo.png" | ||
| funder: true | ||
| funding_id: "824087" | ||
| funding_system: cordis | ||
| funding_statement: | | ||
| EOSC-Life has received funding from the European Union’s Horizon 2020 programme under grant agreement number 824087 | ||
| url: https://www.eosc-life.eu | ||
|
|
||
| by-covid: | ||
| name: BeYond-COVID | ||
| joined: 2023-04 | ||
| funder: true | ||
| funding_id: "101046203" | ||
| funding_system: cordis | ||
| funding_statement: | | ||
| BY-COVID is an EC funded project that tackles the data challenges that can hinder effective pandemic response. | ||
| This project has received funding from the European Union’s Horizon Europe research and innovation programme under grant agreement № 101046203 (BY-COVID) | ||
| url: https://by-covid.org/ | ||
|
|
||
| elixir-fair-data: | ||
| name: "ELIXIR-UK: FAIR Data Stewardship training" | ||
| short_name: "ELIXIR Fair Data" | ||
| github: false | ||
| joined: 2023-06 | ||
| funder: true | ||
| funding_id: MR/V038966/1 | ||
| funding_system: ukri | ||
| funding_statement: | | ||
| This work has been funded by the ELIXIR-UK FAIR Data Stewardship training UKRI award (MR/V038966/1) | ||
| h2020-defend: | ||
| name: "Addressing the dual emerging threats of African Swine Fever and Lumpy Skin Disease in Europe" | ||
| short_name: DEFEND | ||
| github: false | ||
| joined: 2023-05 | ||
| funder: true | ||
| funding_id: "773701" | ||
| funding_system: cordis | ||
| funding_statement: | | ||
| DEFEND is Addressing the dual emerging threats of African Swine Fever and Lumpy Skin Disease in Europe. | ||
| This work has received funding from the DEFEND project (www.defend2020.eu) with funding from the European Union's Horizon 2020 research and innovation programme under grant agreement No 773701. | ||
| url: https://www.defend2020.eu | ||
|
|
||
| elixir-converge: | ||
| name: ELIXIR-CONVERGE | ||
| github: false | ||
| joined: 2023-01 | ||
| avatar: "https://elixir-europe.org/sites/default/files/styles/right-medium/public/images/converge_logo.png" | ||
| url: https://elixir-europe.org/about-us/how-funded/eu-projects/converge | ||
| funder: true | ||
| funding_id: "871075" | ||
| funding_system: cordis | ||
| funding_statement: | | ||
| ELIXIR CONVERGE is connecting and align ELIXIR Nodes to deliver sustainable FAIR life-science data management services. This project has received funding from the European Union's Horizon 2020 research and innovation programme under grant agreement № 871075 | ||
| nhgri-gdscn: | ||
| name: National Human Genome Research Institute Genomic Data Science Community Network | ||
| short_name: "NHGRI GDS Community Network" | ||
| github: false | ||
| joined: 2023-06 | ||
| avatar: https://www.ashg.org/wp-content/uploads/2021/07/nhgri-logo-800x167-1.png | ||
| url: https://www.genome.gov/ | ||
| funder: true | ||
| funding_id: 75N92022P00232 | ||
|
|
||
| nhgri-anvil: | ||
| name: National Human Genome Research Institute Genomic Data Science Analysis, Visualization, and Informatics Lab-Space | ||
| short_name: "NHGRI ANVIL" | ||
| github: false | ||
| joined: 2023-06 | ||
| avatar: https://www.ashg.org/wp-content/uploads/2021/07/nhgri-logo-800x167-1.png | ||
| url: https://www.genome.gov/Funded-Programs-Projects/Computational-Genomics-and-Data-Science-Program/Genomic-Analysis-Visualization-Informatics-Lab-space-AnVIL | ||
| funder: true | ||
| funding_id: U24HG010263 | ||
|
|
||
| ai4life: | ||
| name: AI4Life | ||
| github: false | ||
| joined: 2023-07 | ||
| avatar: "/training-material/topics/ai4life/images/AI4Life-logo_giraffe-solid.png" | ||
| url: https://ai4life.eurobioimaging.eu/ | ||
| funder: true | ||
| funding_id: "101057970" | ||
| funding_system: cordis | ||
| funding_statement: | | ||
| AI4Life has received funding from the European Union’s Horizon Europe research and innovation programme under grant agreement number 101057970. | ||
| biont: | ||
| name: BioNT | ||
| github: false | ||
| joined: 2023-09 | ||
| avatar: "http://biont-training.eu/assets/img/BioNT_Logo_Layout_2106_blue_Version_2_cropped.png" | ||
| url: https://biont-training.eu/ | ||
| funder: true | ||
| funding_id: "101100604" | ||
| funding_system: cordis | ||
| funding_statement: | | ||
| Co-funded by the European Union | ||
| ELIXIR-UK-DaSH: | ||
| name: DASH UK | ||
| joined: 2023-10 | ||
| avatar: "https://github.com/galaxyproject/training-material/blob/main/shared/images/dash.png?raw=true" | ||
| url: https://elixiruknode.org/projects/elixir-uk-dash/ | ||
| funder: true | ||
| funding_system: ukri | ||
| funding_id: MR/V038966/1 | ||
| funding_statement: | | ||
| This Fellowship was funded through the ELIXIR-UK DaSH project as part of the UKRI Innovation Scholars: Data Science Training in Health and Bioscience call (DaSH). (MR/V038966/1). The project aims to embed Research Data Management (RDM) know-how into UK universities and institutes by producing and delivering training in FAIR data stewardship using ELIXIR-UK knowledge and resources. | ||
| deNBI: | ||
| name: de.NBI | ||
| funder: true | ||
| url: https://www.denbi.de/ | ||
|
|
||
| NIH: | ||
| name: National Institutes of Health | ||
| short_name: "NIH" | ||
| avatar: /training-material/shared/images/nih.png | ||
| url: https://nih.gov/ | ||
| funder: true | ||
| github: false | ||
|
|
||
| sfb992: | ||
| name: Collaborative Research Centre 992 | ||
| url: https://www.sfb992.uni-freiburg.de/ | ||
| avatar: https://raw.githubusercontent.com/bgruening/presentations/bce348bb606c312d531c479e63a66efc2bc38d44/shared/resources/img/MEDEP.jpg | ||
| github: false | ||
| funder: true | ||
|
|
||
| elixir-excelerate: | ||
| name: Elixir Excelerate | ||
| url: https://www.elixir-europe.org/excelerate/ | ||
| avatar: "/training-material/shared/images/Excelerate_whitebackground.png" | ||
| github: false | ||
| funder: true | ||
|
|
||
| nsf: | ||
| name: National Science Foundation | ||
| url: https://www.nsf.gov | ||
| avatar: "/training-material/shared/images/nsf.gif" | ||
| github: false | ||
| funder: true | ||
|
|
||
| ukmrc: | ||
| name: UK Medical Research Council | ||
| url: https://mrc.ukri.org | ||
| avatar: https://raw.githubusercontent.com/nomadscientist/scrnaseq_training/master/logo.png | ||
| github: false | ||
| funder: true |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,68 @@ | ||
| # List of contributing organisations | ||
| # | ||
| # reference maintainers/contributors by their id in tutorial metadata files | ||
| # | ||
| # valid tags: name, email, linkedin, twitter, gitter, orcid, bio, joined | ||
| # | ||
| # collection names should be equal to github username, if not, add github: false tag | ||
| --- | ||
|
|
||
| # our real contributors <3 (please add yourself in alphabetical order) | ||
|
|
||
| carpentries: | ||
| name: The Carpentries | ||
| joined: 2021-09 | ||
|
|
||
| erasmusmc: | ||
| name: Erasmus Medical Center | ||
| url: https://www.erasmusmc.nl | ||
| avatar: "/training-material/shared/images/logo-erasmusmc.png" | ||
| github: false | ||
|
|
||
| avans-atgm: | ||
| name: Avans Hogeschool | ||
| joined: 2020-11 | ||
| url: https://avans.nl | ||
| avatar: "/training-material/shared/images/logo-avans.png" | ||
|
|
||
| elixir-europe: | ||
| name: ELIXIR Europe | ||
| joined: 2017-09 | ||
| url: https://elixir-europe.org | ||
| avatar: "/training-material/shared/images/elixir.png" | ||
|
|
||
| elixir-goblet-ttt: | ||
| name: ELIXIR Goblet Train the Trainers | ||
| joined: 2022-09 | ||
| github: false | ||
| avatar: "/training-material/shared/images/elixir.png" | ||
|
|
||
| embl-ebi: | ||
| name: European Bioinformatics Institute | ||
| url: https://www.ebi.ac.uk | ||
| avatar: https://raw.githubusercontent.com/nomadscientist/scrnaseq_training/d0fccaa9dc8dc8615eb7146d6c5e96bd36f11f3a/EMBL_EBI_Logo_black.svg | ||
| github: false | ||
|
|
||
| MPIIE: | ||
| name: Max Planck Institute of Immunology and Epigenetics | ||
| url: https://www.ie-freiburg.mpg.de | ||
| avatar: https://raw.githubusercontent.com/bgruening/presentations/master/shared/resources/img/14_MPI_IE_logo_mit_180.gif | ||
| github: false | ||
|
|
||
| uni-freiburg: | ||
| name: University of Freiburg | ||
| url: https://www.uni-freiburg.de/ | ||
| avatar: https://raw.githubusercontent.com/bgruening/presentations/a2e38e4b007994af798320db3a0131c4bb891c0e/shared/resources/img/logo_freiburg.jpg | ||
| github: false | ||
|
|
||
| psu: | ||
| name: The Pennsylvania State University | ||
| url: http://www.psu.edu | ||
| avatar: "/training-material/shared/images/psu.png" | ||
| github: false | ||
|
|
||
| ifb: | ||
| name: Institut Français de Bioinformatique | ||
| url: https://www.france-bioinformatique.fr/ | ||
| avatar: "/training-material/shared/images/ifb.png" | ||
| github: false |
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Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
|
|
@@ -6,7 +6,9 @@ | |
| <meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"> | ||
| <title>Galaxy Training!</title> | ||
|
|
||
| <!-- JavaScript Error Monitoring, and performance tracking. --> | ||
| <meta name="google-site-verification" content="9mOXn2JL833-i7-aioCCEuIdG4_tb6qjwUozB5GJnPQ" /> | ||
|
|
||
| <!-- JavaScript Error Monitoring, and performance tracking. --> | ||
| <script | ||
| src="https://browser.sentry-cdn.com/7.52.1/bundle.tracing.min.js" | ||
| integrity="sha384-muuFXKS3752PNA4rPm9Uq6BLvOfV4CXyr9MHDBPvozOJJUWLKkogEFWOIRoVps43" | ||
|
|
@@ -17,7 +19,7 @@ | |
| console.log("Sentry: opt-in"); | ||
| Sentry.init({ | ||
| dsn: "https://[email protected]/10", | ||
| release: "galaxy-training-network@58d2ae7147cfaf6693ceadb52be3585e13da655b", | ||
| release: "galaxy-training-network@3a5225dd8dad00c5479fa12f0a4cfb7d88b0f9d6", | ||
| integrations: [new Sentry.BrowserTracing(), new Sentry.Replay()], | ||
| sampleRate: 0.1, | ||
| tracesSampleRate: 0.1, | ||
|
|
@@ -55,8 +57,8 @@ | |
| <link rel="preload" href="/training-material/assets/fonts/AtkinsonHyperlegible/Atkinson-Hyperlegible-Italic-102a.woff2" as="font" type="font/woff2" crossorigin> | ||
| <link rel="preload" href="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.1/MathJax.js?config=TeX-AMS-MML_HTMLorMML" as="script" crossorigin> | ||
| <link rel="preload" href="/training-material/assets/css/main.css?v=3" as="style"> | ||
| <link rel='preload' href='/training-material/assets/js/bundle.theme.js?v=1698940402' as='script'> | ||
| <link rel='preload' href='/training-material/assets/js/bundle.main.js?v=1698940402' as='script'> | ||
| <link rel='preload' href='/training-material/assets/js/bundle.theme.js?v=1698946796' as='script'> | ||
| <link rel='preload' href='/training-material/assets/js/bundle.main.js?v=1698946796' as='script'> | ||
| <link rel="stylesheet" href="/training-material/assets/css/main.css?v=3"> | ||
| <link rel="manifest" href="/training-material/manifest.json"> | ||
| <meta name="theme-color" content="#2c3143"/> | ||
|
|
@@ -82,7 +84,7 @@ | |
|
|
||
| </head> | ||
| <body data-spy="scroll" data-target="#toc" data-brightness="auto" data-contrast="auto"> | ||
| <script src='/training-material/assets/js/bundle.theme.js?v=1698940402'></script> | ||
| <script src='/training-material/assets/js/bundle.theme.js?v=1698946796'></script> | ||
| <header> | ||
| <nav class="navbar navbar-expand-md navbar-dark" aria-label="Site Navigation"> | ||
| <div class="container"> | ||
|
|
@@ -283,7 +285,7 @@ <h3 id="additional-features">Additional Features</h3> | |
| The GTN infrastructure is licensed under <a rel="license" href="https://github.com/galaxyproject/training-material/blob/main/LICENSE.md">MIT</a> | ||
| </p> | ||
| <p> | ||
| Revision <a href="https://github.com/galaxyproject/training-material/commit/58d2ae7147cfaf6693ceadb52be3585e13da655b">58d2ae7</a>, built with Jekyll (4.3.2 | production) | ||
| Revision <a href="https://github.com/galaxyproject/training-material/commit/3a5225dd8dad00c5479fa12f0a4cfb7d88b0f9d6">3a5225d</a>, built with Jekyll (4.3.2 | production) | ||
| </p> | ||
| </div> | ||
| <div class="col-sm-6" style="text-align: right"> | ||
|
|
@@ -307,7 +309,7 @@ <h3 id="additional-features">Additional Features</h3> | |
| </footer> | ||
|
|
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|
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| <script src='/training-material/assets/js/bundle.main.js?v=1698940402'></script> | ||
| <script src='/training-material/assets/js/bundle.main.js?v=1698946796'></script> | ||
| <script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.1/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script> | ||
| </body> | ||
| </html> | ||
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