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remove citation because it won't format well
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nomadscientist committed Dec 15, 2023
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Expand Up @@ -88,11 +88,3 @@ @article{Cakir2020
title = {Comparison of visualization tools for single-cell {RNAseq} data},
journal = {{NAR} Genomics and Bioinformatics}
}

@article{scanpytutorialsTrajectoryInference,
author = {Alex Wolf, Fidel Ramirez, Sergei Rybakov},
title = {{T}rajectory inference for hematopoiesis in mouse \— scanpy-tutorials 1.4.7.dev38+g3e4e434 documentation --- scanpy-tutorials.readthedocs.io},
howpublished = {\url{https://scanpy-tutorials.readthedocs.io/en/latest/paga-paul15.html}},
year = {2023},
note = {[Accessed 15-12-2023]},
}
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Expand Up @@ -46,7 +46,7 @@ Traditionally, we thought that differentiating or changing cells jumped between
We will use the same sample from the previous three tutorials, which contains largely T-cells in the thymus. We know T-cells differentiate in the thymus, so we would assume that we would capture cells at slightly different time points within the same sample. Furthermore, our cluster analysis alone showed different states of T-cells. Now it's time to look further!

> <comment-title>Tutorial from Scanpy</comment-title>
> Please note, this tutorial is largely based on the trajectories tutorial found [on the Scanpy site itself](https://scanpy-tutorials.readthedocs.io/en/latest/paga-paul15.html) {% cite scanpytutorialsTrajectoryInference %}.
> Please note, this tutorial is largely based on the trajectories tutorial found [on the Scanpy site itself](https://scanpy-tutorials.readthedocs.io/en/latest/paga-paul15.html).
{: .comment}

> <agenda-title></agenda-title>
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