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Update another nanoplot version
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neoformit committed Sep 19, 2023
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Expand Up @@ -1088,6 +1088,6 @@ Quality control steps are similar for any type of sequencing data:
- Quality assessment with tools like:
- *Short Reads*: {% tool [FASTQE](toolshed.g2.bx.psu.edu/repos/iuc/fastqe/fastqe/0.2.6+galaxy2) %}
- *Short+Long*: {% tool [FASTQC](toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.73+galaxy0) %}
- *Long Reads*: {% tool [Nanoplot](toolshed.g2.bx.psu.edu/repos/iuc/nanoplot/nanoplot/1.28.2+galaxy1) %}
- *Long Reads*: {% tool [Nanoplot](toolshed.g2.bx.psu.edu/repos/iuc/nanoplot/nanoplot/1.41.0+galaxy0) %}
- *Nanopore only*: {% tool [PycoQC](toolshed.g2.bx.psu.edu/repos/iuc/pycoqc/pycoqc/2.5.2+galaxy0) %}
- Trimming and filtering for **short reads** with a tool like **Cutadapt** {% icon tool %}

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