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Merge pull request #715 from mvdbeek/update_all_10_04
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Update trusted owner tools
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mvdbeek authored Apr 10, 2024
2 parents 4967635 + e0326ca commit a02e77d
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Showing 22 changed files with 65 additions and 44 deletions.
3 changes: 2 additions & 1 deletion usegalaxy.org/annotation.yml.lock
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Expand Up @@ -420,14 +420,15 @@ tools:
- name: cpat
owner: bgruening
revisions:
- 8e9e228c54c4
- 1ac12c0cc7a0
- 8e9e228c54c4
tool_panel_section_id: annotation
tool_panel_section_label: Annotation
- name: mitos2
owner: iuc
revisions:
- 033755194fe9
- 73b018c57e96
- af3c1dc1d141
- b815ec682418
- e95d52d295d7
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2 changes: 2 additions & 0 deletions usegalaxy.org/convert_formats.yml.lock
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Expand Up @@ -190,6 +190,7 @@ tools:
- name: graphicsmagick_image_montage
owner: bgruening
revisions:
- 31dfed0f0eed
- 391a19477a12
- 39881709807e
- 8dbc700cb940
Expand All @@ -199,6 +200,7 @@ tools:
owner: galaxyp
revisions:
- 3cf310697624
- 545054b15d7c
- 6153e8ada1ee
tool_panel_section_id: convert_formats
tool_panel_section_label: Convert Formats
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1 change: 1 addition & 0 deletions usegalaxy.org/data_managers.yml.lock
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Expand Up @@ -110,6 +110,7 @@ tools:
- name: data_manager_mapseq
owner: iuc
revisions:
- 4cd97cc67061
- dbf2735e8480
tool_panel_section_id: data_managers
tool_panel_section_label: Data Managers
4 changes: 4 additions & 0 deletions usegalaxy.org/epigenetics.yml.lock
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Expand Up @@ -55,6 +55,7 @@ tools:
- name: cooler_makebins
owner: lldelisle
revisions:
- 3df254580b06
- c3dc51297bf8
- ebd2a52eb245
- f67664a4e1d6
Expand All @@ -63,6 +64,7 @@ tools:
- name: cooler_csort_tabix
owner: lldelisle
revisions:
- 026950a1853c
- 5cb855a2dc9e
- 8c3cba559c99
- d56db0e1555d
Expand All @@ -72,6 +74,7 @@ tools:
owner: lldelisle
revisions:
- 0641e1c892c6
- 168e86e96afa
- 3ff6eeca667e
- c639f60ae76a
tool_panel_section_id: epigenetics
Expand All @@ -82,5 +85,6 @@ tools:
- 8f71aaf6e59d
- 8f9fe0667b89
- 9655af207032
- b387933e4d3d
tool_panel_section_id: epigenetics
tool_panel_section_label: Epigenetics
1 change: 1 addition & 0 deletions usegalaxy.org/evolution.yml.lock
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Expand Up @@ -19,6 +19,7 @@ tools:
- name: iqtree
owner: iuc
revisions:
- 24d024316465
- 524d31add34a
- 563c3aa769f2
- 973a28be3b7f
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7 changes: 4 additions & 3 deletions usegalaxy.org/get_data.yml.lock
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Expand Up @@ -6,6 +6,7 @@ tools:
- name: sra_tools
owner: iuc
revisions:
- 1ec814014652
- 248f85ff0733
- 4317d3cb6cba
- 4df8de2d0e48
Expand All @@ -18,26 +19,26 @@ tools:
- 83c7d564b128
- 964579f93c54
- aad3885b3216
- ba931a59dd59
- c441583adae5
- e08a7ad4378b
- e407b9da183a
- f5ea3ce9b9b0
- 1ec814014652
tool_panel_section_id: get_data
tool_panel_section_label: Get Data
- name: ncbi_datasets
owner: iuc
revisions:
- 0622d99c2619
- 18eed8fa7f23
- 198c75abbf55
- 1e188c9610c3
- 5a2656cc84cb
- 6c829a430475
- 75acf92c8fd5
- a3395b1d871b
- b2ae7186d41f
- c47a0a93ffd2
- 198c75abbf55
tool_panel_section_id: get_data
tool_panel_section_label: Get Data
- name: ebi_metagenomics_run_downloader
Expand Down Expand Up @@ -69,10 +70,10 @@ tools:
- name: unipept
owner: galaxyp
revisions:
- 21a560af5913
- 34758ab8aaa4
- 7863f1abcdda
- 9aaa46d45472
- 21a560af5913
tool_panel_section_id: get_data
tool_panel_section_label: Get Data
- name: ega_download_client
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4 changes: 2 additions & 2 deletions usegalaxy.org/graph_display_data.yml.lock
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Expand Up @@ -66,10 +66,10 @@ tools:
- name: ggplot2_heatmap2
owner: iuc
revisions:
- 374e9062d874
- 53460afd5115
- '566197475670'
- ca7cb0eaad62
- 374e9062d874
tool_panel_section_id: graph_display_data
tool_panel_section_label: Graph/Display Data
- name: circos
Expand Down Expand Up @@ -283,13 +283,13 @@ tools:
- 2824d77cd8f8
- 326a3db8d9d1
- 360df4999907
- 36b848d5f3ec
- 4ac4e7083b7e
- 59fd173ac850
- 5cec5fb749f0
- 7dd841a32245
- a1abfa420d9d
- eca03db4f612
- 36b848d5f3ec
tool_panel_section_id: graph_display_data
tool_panel_section_label: Graph/Display Data
- name: tsne
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1 change: 1 addition & 0 deletions usegalaxy.org/machine_learning.yml.lock
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Expand Up @@ -482,6 +482,7 @@ tools:
- name: chopin2
owner: iuc
revisions:
- 693bfd012601
- d49893faf877
tool_panel_section_id: machine_learning
tool_panel_section_label: Machine Learning
7 changes: 4 additions & 3 deletions usegalaxy.org/mapping.yml.lock
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Expand Up @@ -6,12 +6,12 @@ tools:
- name: bioext_bealign
owner: iuc
revisions:
- 8a7462c0ac14
- a07a2d9ddd42
- a287431cdf4f
- d8b6f0adaa79
- f9b72a376ec9
- fb4975b507c6
- 8a7462c0ac14
tool_panel_section_id: mapping
tool_panel_section_label: Mapping
- name: bowtie2
Expand All @@ -20,10 +20,10 @@ tools:
- 017aba02828d
- 03e9b2fbc005
- 09b2cdb7ace5
- 0d4acadabb04
- 749c918495f7
- c3dd1aeb7d07
- f6877ad76b00
- 0d4acadabb04
tool_panel_section_id: mapping
tool_panel_section_label: Mapping
- name: lastz
Expand Down Expand Up @@ -95,13 +95,14 @@ tools:
- 1f06dccdc5d1
- 3f4d6399997b
- 53c0b7a1a0c3
- 5cc34c3f440d
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- 92678fcb1a5f
- b3eab4b67562
- be1d967337e4
- c0c2d0941de8
- f54f5baedfdd
- 92678fcb1a5f
tool_panel_section_id: mapping
tool_panel_section_label: Mapping
- name: rna_starsolo
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18 changes: 9 additions & 9 deletions usegalaxy.org/metagenomic_analysis.yml.lock
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Expand Up @@ -32,38 +32,38 @@ tools:
- name: vegan_rarefaction
owner: iuc
revisions:
- b0d5976540e3
- af1211ed6c8e
- b0d5976540e3
tool_panel_section_id: metagenomic_analysis
tool_panel_section_label: Metagenomic Analysis
- name: vegan_fisher_alpha
owner: iuc
revisions:
- f9966e11885b
- 0148e5cf20b2
- f9966e11885b
tool_panel_section_id: metagenomic_analysis
tool_panel_section_label: Metagenomic Analysis
- name: vegan_diversity
owner: iuc
revisions:
- a2c047a2c380
- a1b80a746054
- a2c047a2c380
tool_panel_section_id: metagenomic_analysis
tool_panel_section_label: Metagenomic Analysis
- name: kraken_report
owner: devteam
revisions:
- 1902d3de4a4f
- 6c09bed3444f
- 1c677354ab18
- 6c09bed3444f
tool_panel_section_id: metagenomic_analysis
tool_panel_section_label: Metagenomic Analysis
- name: kraken
owner: devteam
revisions:
- 766d5f63b0f4
- 8ba2174315aa
- aec58624706f
- 766d5f63b0f4
tool_panel_section_id: metagenomic_analysis
tool_panel_section_label: Metagenomic Analysis
- name: taxonomy_krona_chart
Expand Down Expand Up @@ -101,9 +101,9 @@ tools:
- 4a6ee918c13a
- 6ef0b5664c69
- a3b86937ead6
- ab9350a8ab4d
- dad9da48a09a
- e3cbd2287f63
- ab9350a8ab4d
tool_panel_section_id: metagenomic_analysis
tool_panel_section_label: Metagenomic Analysis
- name: biom_convert
Expand All @@ -117,17 +117,17 @@ tools:
- 72ed72122deb
- a4db66553a61
- bd46669113b9
- e177a8ea0bf1
- d4d4e9febf5c
- e177a8ea0bf1
tool_panel_section_id: metagenomic_analysis
tool_panel_section_label: Metagenomic Analysis
- name: kraken_translate
owner: devteam
revisions:
- 8cebdc74a48f
- 9a5be5b1a5c9
- 9bdcba262627
- bc3e90fd13be
- 8cebdc74a48f
tool_panel_section_id: metagenomic_analysis
tool_panel_section_label: Metagenomic Analysis
- name: kraken_filter
Expand Down Expand Up @@ -394,9 +394,9 @@ tools:
- name: plasflow
owner: iuc
revisions:
- 1d2a91ab28b7
- bda6012394f7
- ea270d0ad0e6
- 1d2a91ab28b7
tool_panel_section_id: metagenomic_analysis
tool_panel_section_label: Metagenomic Analysis
- name: valet
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12 changes: 6 additions & 6 deletions usegalaxy.org/multiple_alignments.yml.lock
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Expand Up @@ -34,9 +34,9 @@ tools:
- 6f28e90db932
- a65296ffb4a0
- aaefa93c2dd2
- bf28a8cff401
- c5908940967d
- f1a5908ea2cb
- bf28a8cff401
tool_panel_section_id: multiple_alignments
tool_panel_section_label: Multiple Alignments
- name: clustalw
Expand All @@ -60,28 +60,28 @@ tools:
- 502018997bae
- abe34706eddf
- b3acbb3a6af0
- fbca557a4847
- e8fdceffea4c
- fbca557a4847
tool_panel_section_id: multiple_alignments
tool_panel_section_label: Multiple Alignments
- name: mummer_mummer
owner: iuc
revisions:
- 48823c9635a4
- 48badcd29c5d
- 57f042937ba7
- bcd65de9725b
- fc143c06a842
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tool_panel_section_id: multiple_alignments
tool_panel_section_label: Multiple Alignments
- name: mummer_dnadiff
owner: iuc
revisions:
- 315c678562d2
- 5561a1193611
- 60698466facd
- c9685bc0407c
- deacc6b40cc0
- 5561a1193611
tool_panel_section_id: multiple_alignments
tool_panel_section_label: Multiple Alignments
- name: mummer_show_coords
Expand All @@ -90,8 +90,8 @@ tools:
- 959c1f8dae95
- b4124df98b26
- b8e2c2f95d26
- f8734af48332
- cf3c9489c088
- f8734af48332
tool_panel_section_id: multiple_alignments
tool_panel_section_label: Multiple Alignments
- name: mummer_mummerplot
Expand All @@ -109,9 +109,9 @@ tools:
revisions:
- 5b0b49b5421c
- 636b049e6141
- 7cd7a55a678d
- a18fb4f826fc
- e18267f90096
- 7cd7a55a678d
tool_panel_section_id: multiple_alignments
tool_panel_section_label: Multiple Alignments
- name: pipelign
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5 changes: 3 additions & 2 deletions usegalaxy.org/nanopore.yml.lock
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Expand Up @@ -99,9 +99,10 @@ tools:
revisions:
- 0f1c34698076
- 645159bcee2d
- 7b379e98b9a9
- a02b8b3f5a0c
- a3c4fe6f49ab
- edbb6c5028f5
- 7b379e98b9a9
tool_panel_section_id: nanopore
tool_panel_section_label: Nanopore
- name: porechop
Expand Down Expand Up @@ -175,12 +176,12 @@ tools:
revisions:
- 0284be52bfcf
- 276f5d8712d5
- 291923e6f276
- 3ee0ef312022
- 8d4f03b5fe9d
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- e27815e82dd4
- 291923e6f276
tool_panel_section_id: nanopore
tool_panel_section_label: Nanopore
- name: pycoqc
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2 changes: 1 addition & 1 deletion usegalaxy.org/ncbi_blast_.yml.lock
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Expand Up @@ -10,9 +10,9 @@ tools:
- 2889433c7ae1
- 5edc472ec434
- a52d2d93e595
- cbf3f518b668
- d999e774072a
- e25d3acf6e68
- cbf3f518b668
tool_panel_section_id: ncbi_blast_
tool_panel_section_label: NCBI BLAST+
- name: kraken2
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