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@galaxyproteomics

GalaxyP

Galaxy Tool Shed repositories maintained and developed by the GalaxyP community

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  1. tools-galaxyp tools-galaxyp Public

    Galaxy Tool Shed repositories maintained and developed by the GalaxyP community

    JavaScript 35 58

  2. docker-galaxyp docker-galaxyp Public

    🐳 Galaxy Docker repository with tools for proteomics (GalaxyP flavour)

    Dockerfile 7 5

  3. metaquantome metaquantome Public

    Python 5 6

  4. validate_fasta_database validate_fasta_database Public

    Galaxy tool to validate a FASTA database by comparing it to known FASTA formats.

    Java 2

  5. peptideshaker peptideshaker Public

    CSS 1

  6. mzToSQLite mzToSQLite Public

    Convert proteomics data files into a SQLite database

    Java 1 1

Repositories

Showing 10 of 31 repositories
  • tools-galaxyp Public

    Galaxy Tool Shed repositories maintained and developed by the GalaxyP community

    JavaScript 35 MIT 58 65 (1 issue needs help) 44 Updated Feb 1, 2025
  • CancerResearch2017 Public
    0 1 0 0 Updated Jul 20, 2023
  • mvpapplication-git Public

    The Galaxy MVP visualization plugin enables viewing of results produced from workflows integrating genomic sequencing data and mass spectrometry proteomics data.

    JavaScript 1 2 0 0 Updated Aug 10, 2022
  • bioconda-recipes Public Forked from bioconda/bioconda-recipes

    Conda recipes for the bioconda channel.

    Shell 0 MIT 3,410 0 0 Updated Jun 27, 2022
  • proteomics-pipelines Public Forked from uct-cbio/proteomics-pipelines

    A repo with a proteogenomics and metaproteomics pipeline developed by Matthys Potgieter.

    Jupyter Notebook 0 MIT 4 0 0 Updated Dec 1, 2021
  • mzToSQLite Public

    Convert proteomics data files into a SQLite database

    Java 1 GPL-2.0 1 1 0 Updated Oct 28, 2021
  • metaquantome Public
    Python 5 Apache-2.0 6 11 2 Updated Jun 16, 2021
  • metaquantome_mcp_analysis Public

    Analysis scripts for the metaQuantome MCP paper

    HTML 0 GPL-3.0 4 1 0 Updated Feb 22, 2021
  • psm_fragments Public

    PSM validation against ion fragmentation

    Python 1 0 0 0 Updated Oct 14, 2020
  • egglet Public

    small data for eggnog-mapper testing

    Shell 0 1 0 0 Updated Aug 25, 2020
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