Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Update gpad-gpi-2-0.md #4790

Closed
wants to merge 1 commit into from
Closed

Update gpad-gpi-2-0.md #4790

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
3 changes: 1 addition & 2 deletions specs/gpad-gpi-2-0.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -6,8 +6,7 @@ This document specifies the syntax of Gene Product Annotation Data (GPAD) and Ge

This is a working draft, intended for comment by the community. Comments should be added to: [#4684](https://github.com/geneontology/go-annotation/issues/4684)

## Summary of changes relative to 1.1

## Summary of changes relative to [GPAD/GPI 1.1](https://geneontology.org/docs/gene-product-association-data-gpad-format/)
- GPAD and GPI: columns 1 and 2 are now combined in a single column containing an id in CURIE syntax, e.g. UniProtKB:P56704.
- GPAD: negation is captured in a separate column, column 2, using the text string 'NOT'.
- GPAD: gene product-to-term relations captured in column 3 use a Relations Ontology (RO) identifier instead of a text string.
Expand Down