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Update gorules_test_errors.gaf
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@pgaudet
pgaudet authored Aug 31, 2023
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15 changes: 12 additions & 3 deletions docs/gorules_test_errors.gaf
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Expand Up @@ -135,7 +135,16 @@ SGN 235 cpk1 GO:0005886 PMID:12011347 IDA C GORULE:0000059-1 calcium-dependent
FB FBgn0011273 Acam part_of GO:0070865 FB:FBrf0193169|PMID:16790438 IDA C GORULE:0000061-1 Androcam ACaM|And|CG17769|CalB|Calmodulin-related 97A|Camr97A|androcalmodulin|androcam protein taxon:7227 20180501 FlyBase
! FAILS GORULE:0000061 - fails because no data in column 4
FB FBgn0011273 Acam GO:0070865 FB:FBrf0193169|PMID:16790438 IDA C GORULE:0000061-2 Androcam ACaM|And|CG17769|CalB|Calmodulin-related 97A|Camr97A|androcalmodulin|androcam protein taxon:7227 20180501 FlyBase
! FAILS GORULE:0000061 - the part_of GP2term relation is not allowed for GO:0070864
! FAILS GORULE:0000061 - the 'part_of' GP2term relation is not allowed for GO:0070864
FB FBgn0011273 shi part_of GO:0070864 PMID:12432073 IDA C GORULE:0000061-3 Dynamin Protein shibire|dDyn protein taxon:7227 20180501 FlyBase
! FAILS GORULE:0000061 - the part_of GP2term relation is not allowed for GO:0140827
UniProtKB A1B2F4 aztD part_of GO:0140827 PMID:26468286 IDA F GORULE:0000061-4 protein taxon:318586 20230427 UniProt has_regulation_target(
! FAILS GORULE:0000061 - the 'part_of' GP2term relation is not allowed for GO:0140827
UniProtKB A1B2F4 aztD part_of GO:0140827 PMID:26468286 IDA F GORULE:0000061-4 protein taxon:318586 20230427 UniProt
! FAILS GORULE:0000061 - the 'enables' GP2term relation is not allowed for GO:0005856
UniProtKB A1B2F4 aztD enables GO:0005856 PMID:26468286 IDA F GORULE:0000061-5 protein taxon:318586 20230427 UniProt
! FAILS GORULE:0000061 - the 'located in' GP2term relation is not allowed for GO:0005575
UniProtKB A1B2F4 aztD located_in GO:0005575 PMID:26468286 IDA F GORULE:0000061-6 protein taxon:318586 20230427 UniProt
! FAILS GORULE:0000061 - the 'contributes_to' GP2term relation is not allowed for GO:0003674
UniProtKB A1B2F4 aztD contributes_to GO:0003674 PMID:26468286 IDA F GORULE:0000061-7 protein taxon:318586 20230427 UniProt
! FAILS GORULE:0000061 - the 'acts upstream of or within' GP2term relation is not allowed for GO:0008150
UniProtKB A1B2F4 aztD acts_upstream_of_or_within GO:0008150 PMID:26468286 IDA F GORULE:0000061-8 protein taxon:318586 20230427 UniProt

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