Merge pull request #135 from geneontology/ce-negated

Testing ComplementOf expressions
geneontology · Aug 24, 2017 · 20e172c · 20e172c
2 parents 24a12d3 + 23db2ef
commit 20e172c
Showing 1 changed file with 18 additions and 0 deletions.
diff --git a/...-server/src/test/java/org/geneontology/minerva/server/handler/M3ExpressionParserTest.java b/...-server/src/test/java/org/geneontology/minerva/server/handler/M3ExpressionParserTest.java
@@ -15,7 +15,9 @@
 import org.junit.BeforeClass;
 import org.junit.Test;
 import org.semanticweb.owlapi.model.IRI;
+import org.semanticweb.owlapi.model.OWLClass;
 import org.semanticweb.owlapi.model.OWLClassExpression;
+import org.semanticweb.owlapi.model.OWLObjectComplementOf;
 import org.semanticweb.owlapi.model.OWLOntologyCreationException;
 
 import owltools.graph.OWLGraphWrapper;
@@ -116,6 +118,22 @@ public void testParseClazz() throws Exception {
 		assertEquals(graph.getOWLClassByIdentifier(CELL_MORPHOGENESIS), ce);
 	}
 
+	@Test
+	public void testParseClazzNegated() throws Exception {
+
+	    JsonOwlObject expression = new JsonOwlObject();
+	    expression.type = JsonOwlObjectType.ComplementOf;
+	    expression.filler = new JsonOwlObject();
+	    expression.filler.id = NUCLEUS;
+        expression.filler.type = JsonOwlObjectType.Class;
+
+	    OWLClassExpression ce = new M3ExpressionParser(curieHandler).parse(graph, expression, null);
+	    OWLClass nucleus = graph.getOWLClassByIdentifier(NUCLEUS);
+	    OWLObjectComplementOf ceExpected = graph.getDataFactory().getOWLObjectComplementOf(nucleus);
+	    assertEquals(ceExpected, ce);
+	}
+
+
 	/**
      * test that Default expression parser will throw UnknownIdentifierException
      * when confronted with a non-CURIE