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Issue noctua models 170 zfin import test #182

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17 changes: 17 additions & 0 deletions .github/workflows/run-tests.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,17 @@
name: run-owltools-test
on: [push]

jobs:
build:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2

- name: Run tests
run: |
mkdir -p bin
export PATH=$PATH:$PWD/bin
wget https://github.com/owlcollab/owltools/releases/download/2020-04-06/owltools -O bin/owltools
wget https://github.com/owlcollab/owltools/releases/download/2020-04-06/owltools-oort-all.jar -O bin/owltools-runner-all.jar
chmod +x bin/*
make travis-test
13 changes: 8 additions & 5 deletions .travis.yml
Original file line number Diff line number Diff line change
@@ -1,12 +1,15 @@
language: java
jdk:
- oraclejdk8
dist: xenial

before_install:
- sudo apt-get update
- sudo apt-get install -y wget

before_script:
- mkdir -p bin
- export PATH=$PATH:$PWD/bin
- wget http://build.berkeleybop.org/userContent/owltools/owltools -O bin/owltools
- wget http://build.berkeleybop.org/userContent/owltools/owltools-runner-all.jar -O bin/owltools-runner-all.jar
- wget https://github.com/owlcollab/owltools/releases/download/2020-04-06/owltools -O bin/owltools
- wget https://github.com/owlcollab/owltools/releases/download/2020-04-06/owltools-oort-all.jar -O bin/owltools-runner-all.jar
- chmod +x bin/*

# command to run tests
Expand All @@ -22,5 +25,5 @@ branches:

notifications:
email:
- cjmungall@lbl.gov
- sjcarbon@lbl.gov

2 changes: 1 addition & 1 deletion Makefile
Original file line number Diff line number Diff line change
Expand Up @@ -24,7 +24,7 @@ clean:
# instead we therefore perform a bare-bones OWL syntax check using the OWLAPI on each model.
# we use the fake-catalog which rewires go-lego.owl to an empty file.
travis-test:
owltools --catalog-xml fake-catalog.xml models/*.ttl
owltools --catalog-xml fake-catalog.xml models/*.ttl > /dev/null

# ----------------------------------------
# EXPORT TO GPAD
Expand Down
311 changes: 0 additions & 311 deletions models/593423e000000013.ttl

This file was deleted.

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