fix vcf conversion

genome-nexus · May 5, 2020 · 5c55c7b · 5c55c7b
1 parent ba1d6dc
commit 5c55c7b
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/src/index.ts b/src/index.ts
@@ -25,8 +25,8 @@ program
 program
     .command('convert')
     .description('convert between different mutation formats (e.g. VCF to MAF)')
-    .action((inputFile, args) => {
-        convertVCFtoMAF(inputFile);
+    .action((input, args) => {
+        convertVCFtoMAF(args[0]);
     });
 
 program.command('annotate', 'retrieve annotations');