Add Jupyter notebook for control file editor #13
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name: tests on Ubuntu and MacOS | |
on: [push, pull_request] | |
concurrency: | |
group: ${{ github.actor }}-${{ github.ref }} | |
cancel-in-progress: true | |
env: | |
# Avoid a warning | |
# OMPI_MCA_btl_base_warn_component_unused: 0 | |
# Prevent slowdown when oversubscribing (e.g. 4 ranks of 2 cores) | |
# OMPI_MCA_mpi_yield_when_idle: 1 | |
# OMPI_MCA_rmaps_base_oversubscribe: 1 | |
# Allow run as root | |
OMPI_ALLOW_RUN_AS_ROOT: 1 | |
OMPI_ALLOW_RUN_AS_ROOT_CONFIRM: 1 | |
# Fix OpenMPI issue in Docker : https://github.com/open-mpi/ompi/issues/4948 | |
# OMPI_MCA_btl_vader_single_copy_mechanism: none | |
jobs: | |
Run-on-Ubuntu: | |
name: test-compile on Ubuntu | |
runs-on: [ubuntu-20.04] | |
steps: | |
- uses: actions/checkout@v2 | |
- name: build | |
run: | | |
sudo apt install pkg-config git gfortran libopenmpi-dev \ | |
zlib1g zlib1g-dev libblas-dev libfftw3-dev libhdf5-openmpi-dev | |
./configure \ | |
--enable-fftw3 \ | |
--with-hdf5 \ | |
--with-blas \ | |
--with-zlib \ | |
MPIRUN="mpirun --oversubscribe" | |
make | |
make test | |
Run-on-Mac: | |
name: test-compile on Mac | |
runs-on: [macos-latest] | |
steps: | |
- uses: actions/checkout@v2 | |
- name: build | |
run: | | |
brew info gfortran | |
brew info open-mpi | |
brew install gfortran | |
a=`which gfortran-11`; \ | |
b=`dirname $a`; \ | |
c=$b/gfortran; \ | |
ln -s $a $c | |
brew install open-mpi fftw hdf5-mpi | |
mpicc -v | |
mpif90 -v | |
./configure \ | |
--enable-fftw3 \ | |
--with-hdf5 \ | |
--with-blas \ | |
--with-zlib \ | |
MPIRUN="mpirun --oversubscribe" | |
make | |
make test | |