sort the output records by ROI index/ID

gerlichlab · Nov 19, 2024 · c8a4caf · c8a4caf
1 parent ada8251
commit c8a4caf
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/main/scala/AssignTraceIds.scala b/src/main/scala/AssignTraceIds.scala
@@ -321,7 +321,7 @@ object AssignTraceIds extends ScoptCliReaders, StrictLogging:
                         SpotChannelColumnName.toNamedEncoder
                     logger.info(s"Writing output file: $outputFile")
                     fs2.Stream
-                        .emits(records.toList)
+                        .emits(records.sortBy(_._1.index).toList)
                         .through(writeCaseClassesToCsv[OutputRecord](outputFile))
                         .compile
                         .drain