Knime Components (those I developed for data engineering in biology or clinical research domain)

Note

Issue reporting and feature request for Knime Components those I shared here Knime Hub

Report issues or submit feature request here https://github.com/gh-osh/knime-components/issues

Current list of components

DateStamper ↓ Prefix current date in YYYYMMDD with the file-name. The date stamped file-name is available as a variable and can be used in any file creation dialog like CSV or EXCEL writer node.

GeneNameToID ↓ Get Ensembl Gene ID from HGNC symbol or gene name

PubMedSearch ↓ This PubMedSearch component enables the search for life sciences and biomedical topics in PubMed, a free search engine developed and maintained by the National Center for Biotechnology Information (NCBI) at the National Library of Medicine (NLM). It performs a search on PubMed and returns a table with the search results, including the Title, Abstract, Journal, Publication Year, and DOI. To use it, form your query in the PubMed Query box in Advanced Search. Double-click the component to paste the query string into the Query box. Please note that if the search yields no results, the component will fail.