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update online manual
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2 changes: 1 addition & 1 deletion docs/copying.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-16"/>
<meta name="date" content="2024-05-17"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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6 changes: 3 additions & 3 deletions docs/description.json
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@@ -1,14 +1,14 @@
{
"generator": "generate_html",
"generator_version": "0.3.3",
"date_generated": "2024-05-16",
"date_generated": "2024-05-17",
"package":
{
"name": "statistics-resampling",
"version": "5.5.12",
"version": "5.5.13",
"description": "The statistics-resampling package is an Octave package and Matlab toolbox that can be used to perform a wide variety of statistics tasks using non-parametric resampling methods. In particular, the functions included can be used to estimate bias, uncertainty (standard errors and confidence intervals), prediction error, and calculate p-values for null hypothesis significance tests. Variations of the resampling methods are included that improve the accuracy of the statistics for small samples and samples with complex dependence structures.",
"shortdescription": "The statistics-resampling package is an Octave package and Matlab toolbox that can be used to perform a wide variety of statistics tasks using non-parametric resampling methods",
"date": "2024-05-15",
"date": "2024-05-17",
"title": "A statistics package with a variety of resampling tools",
"author": "Andrew Penn <[email protected]>",
"maintainer": "Andrew Penn <[email protected]>",
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4 changes: 2 additions & 2 deletions docs/function/boot.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-16"/>
<meta name="date" content="2024-05-17"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
Expand Down Expand Up @@ -87,7 +87,7 @@ <h2>boot</h2>
vs. Smoothing; Proceedings of the Section on Statistics & the
Environment. Alexandria, VA: American Statistical Association.

boot (version 2024.04.16)
boot (version 2024.04.24)
Author: Andrew Charles Penn
https://www.researchgate.net/profile/Andrew_Penn/

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8 changes: 4 additions & 4 deletions docs/function/boot1way.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-16"/>
<meta name="date" content="2024-05-17"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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[1] Efron, and Tibshirani (1993) An Introduction to the Bootstrap.
New York, NY: Chapman & Hall

boot1way (version 2023.10.04)
boot1way (version 2024.04.24)
Bootstrap tests for comparing independent groups in a one-way layout
Author: Andrew Charles Penn
https://www.researchgate.net/profile/Andrew_Penn/
Expand Down Expand Up @@ -529,7 +529,7 @@ <h3><a name="7">Demonstration 7</a></h3>
-----------------------------------------------------------------------------
| Comparison | Test # | Ref # | Difference | t | p |
|------------|------------|------------|------------|------------|----------|
| 1 | 2 | 1 | +0.3821 | +0.95 | .347 |
| 1 | 2 | 1 | +0.1067 | +0.19 | .838 |

-----------------------------------------------------------------------------
| GROUP # | GROUP label | N |
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-----------------------------------------------------------------------------
| Comparison | Test # | Ref # | Difference | t | p |
|------------|------------|------------|------------|------------|----------|
| 1 | 2 | 1 | +0.6944 | +0.95 | .221 |
| 1 | 2 | 1 | -0.3944 | -1.20 | .114 |

-----------------------------------------------------------------------------
| GROUP # | GROUP label | N |
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12 changes: 6 additions & 6 deletions docs/function/bootbayes.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-16"/>
<meta name="date" content="2024-05-17"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
Expand Down Expand Up @@ -146,7 +146,7 @@ <h2>bootbayes</h2>
[3] Liu, Gelman & Zheng (2015). Simulation-efficient shortest probability
intervals. Statistics and Computing, 25(4), 809–819.

bootbayes (version 2023.07.06)
bootbayes (version 2024.05.17)
Author: Andrew Charles Penn
https://www.researchgate.net/profile/Andrew_Penn/

Expand Down Expand Up @@ -182,7 +182,7 @@ <h3><a name="1">Demonstration 1</a></h3>
*******************************************************************************

Bootstrap settings:
Function: sum (w .* Y)
Function: sum (W * Y)
Resampling method: Bayesian bootstrap
Prior: Symmetric Dirichlet distribution (a = 0.8)
Number of resamples: 1999
Expand All @@ -191,7 +191,7 @@ <h3><a name="1">Demonstration 1</a></h3>

Posterior Statistics:
original bias median stdev CI_lower CI_upper
+184.5 -0.02210 +184.5 1.240 +182.1 +186.9</pre>
+184.5 +0.03471 +184.5 1.278 +182.0 +187.1</pre>
</div>

<h3><a name="2">Demonstration 2</a></h3>
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Posterior Statistics:
original bias median stdev CI_lower CI_upper
+175.5 +0.03532 +175.5 2.384 +171.1 +180.3
+0.1904 -0.001074 +0.1909 0.07912 +0.04160 +0.3442</pre>
+175.5 +0.02190 +175.5 2.359 +171.3 +180.6
+0.1904 -0.001762 +0.1898 0.07905 +0.02674 +0.3372</pre>
</div>

<p>Package: <a href="../index.html">statistics-resampling</a></p>
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4 changes: 2 additions & 2 deletions docs/function/bootcdf.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-16"/>
<meta name="date" content="2024-05-17"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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'[x, F, P] = bootcdf (...)' also returns the distribution of P values.

bootcdf (version 2023.07.05)
bootcdf (version 2024.04.21)
Author: Andrew Charles Penn
https://www.researchgate.net/profile/Andrew_Penn/

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8 changes: 4 additions & 4 deletions docs/function/bootci.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-16"/>
<meta name="date" content="2024-05-17"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
Expand Down Expand Up @@ -153,7 +153,7 @@ <h2>bootci</h2>
vs. Smoothing; Proceedings of the Section on Statistics & the
Environment. Alexandria, VA: American Statistical Association.

bootci (version 2023.07.04)
bootci (version 2024.05.13)
Author: Andrew Charles Penn
https://www.researchgate.net/profile/Andrew_Penn/

Expand Down Expand Up @@ -468,8 +468,8 @@ <h3><a name="10">Demonstration 10</a></h3>
<p>Produces the following output</p>
<pre class="example">ci =

-0.49903 -0.32048
0.1719 0.20754</pre>
-0.57173 -0.24514
0.03737 0.43932</pre>
</div>

<h3><a name="11">Demonstration 11</a></h3>
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12 changes: 6 additions & 6 deletions docs/function/bootclust.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-16"/>
<meta name="date" content="2024-05-17"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
Expand Down Expand Up @@ -145,7 +145,7 @@ <h2>bootclust</h2>
vs. Smoothing; Proceedings of the Section on Statistics & the
Environment. Alexandria, VA: American Statistical Association.

bootclust (version 2024.04.02)
bootclust (version 2024.05.16)
Author: Andrew Charles Penn
https://www.researchgate.net/profile/Andrew_Penn/

Expand Down Expand Up @@ -376,8 +376,8 @@ <h3><a name="7">Demonstration 7</a></h3>

Bootstrap Statistics:
original bias std_error CI_lower CI_upper
+0.05661 +0.008427 +0.1783 -0.2258 +0.3597
-0.5011 -0.01251 +0.2094 -0.8576 -0.1695</pre>
-0.2887 -0.007187 +0.1870 -0.6013 +0.01715
-0.1043 -0.008428 +0.2159 -0.4918 +0.2162</pre>
</div>

<h3><a name="8">Demonstration 8</a></h3>
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Bootstrap Statistics:
original bias std_error CI_lower CI_upper
+0.03812 -0.01768 +0.1313 -0.2242 +0.2101
+0.2485 -0.01351 +0.2831 -0.3207 +0.6026</pre>
-0.04184 +0.007876 +0.1804 -0.3145 +0.2714
+0.3486 +0.02326 +0.07954 +0.03027 +0.4184</pre>
</div>

<h3><a name="9">Demonstration 9</a></h3>
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2 changes: 1 addition & 1 deletion docs/function/bootint.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-16"/>
<meta name="date" content="2024-05-17"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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8 changes: 4 additions & 4 deletions docs/function/bootknife.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-16"/>
<meta name="date" content="2024-05-17"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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[9] Gleason, J.R. (1988) Algorithms for Balanced Bootstrap Simulations.
The American Statistician. Vol. 42, No. 4 pp. 263-266

bootknife (version 2023.07.04)
bootknife (version 2024.05.15)
Author: Andrew Charles Penn
https://www.researchgate.net/profile/Andrew_Penn/

Expand Down Expand Up @@ -442,8 +442,8 @@ <h3><a name="8">Demonstration 8</a></h3>

Bootstrap Statistics:
original bias std_error CI_lower CI_upper
-0.3468 -0.01215 +0.2650 -0.8105 +0.05247
+0.5558 -0.01072 +0.2145 +0.1827 +0.8684</pre>
-0.06082 +0.05229 +0.3349 -0.5908 +0.4742
-0.1285 -0.04207 +0.2742 -0.6432 +0.1863</pre>
</div>

<h3><a name="9">Demonstration 9</a></h3>
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16 changes: 8 additions & 8 deletions docs/function/bootlm.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-16"/>
<meta name="date" content="2024-05-17"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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installed and loaded, then these computations will be automatically
accelerated by parallel processing on platforms with multiple processors

bootlm (version 2023.09.01)
bootlm (version 2024.05.17)
Author: Andrew Charles Penn
https://www.researchgate.net/profile/Andrew_Penn/

Expand Down Expand Up @@ -1032,12 +1032,12 @@ <h3><a name="6">Demonstration 6</a></h3>

name mean CI_lower CI_upper N
--------------------------------------------------------------------------------
f, 0 +60.62 +57.41 +64.31 8
m, 0 +66.87 +59.70 +73.74 8
f, 0 +60.63 +57.41 +64.31 8
m, 0 +66.88 +59.70 +73.74 8
f, 2 +62.50 +57.82 +66.98 8
m, 2 +66.87 +57.88 +75.75 8
m, 2 +66.88 +57.88 +75.75 8
f, 4 +57.50 +53.03 +62.83 8
m, 4 +35.62 +28.28 +43.40 8
m, 4 +35.63 +28.28 +43.40 8


MODEL FORMULA (based on Wilkinson's notation):
Expand All @@ -1064,7 +1064,7 @@ <h3><a name="6">Demonstration 6</a></h3>
f, 0 - f, 2 -1.875 -8.048 +4.133 1.000
f, 2 - f, 4 +5.000 -2.170 +12.04 .638
f, 0 - f, 4 +3.125 -3.402 +9.507 .966
m, 0 - m, 2 -3.553e-15 -12.03 +11.70 1.000
m, 0 - m, 2 +6.550e-15 -12.03 +11.70 1.000
m, 2 - m, 4 +31.25 +19.02 +43.41 <.001
m, 0 - m, 4 +31.25 +20.03 +41.98 <.001</pre>
<p>and the following figure</p>
Expand Down Expand Up @@ -1532,7 +1532,7 @@ <h3><a name="10">Demonstration 10</a></h3>
diet:drug_2 -17.00 -37.94 +3.936 .104
diet:feedback_1 -16.00 -35.17 +3.172 .095
drug:feedback_1 -24.00 -42.08 -5.922 .011
drug:feedback_2 -7.061e-14 -19.93 +19.93 1.000
drug:feedback_2 -4.475e-14 -19.93 +19.93 1.000
diet:drug:feedback_1 +35.00 +7.926 +62.07 .013
diet:drug:feedback_2 +5.000 -24.39 +34.39 .737

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6 changes: 3 additions & 3 deletions docs/function/bootmode.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-16"/>
<meta name="date" content="2024-05-17"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
Expand Down Expand Up @@ -149,9 +149,9 @@ <h3><a name="1">Demonstration 1</a></h3>
<p>Produces the following output</p>
<pre class="example">ans = Summary of results:

ans = H1 is 1 with p = 0.0015 so reject the null hypothesisthat there is 1 mode
ans = H1 is 1 with p = 0.001 so reject the null hypothesisthat there is 1 mode

ans = H2 is 0 with p = 0.327 so accept the null hypothesis that there are 2 modes</pre>
ans = H2 is 0 with p = 0.323 so accept the null hypothesis that there are 2 modes</pre>
</div>

<p>Package: <a href="../index.html">statistics-resampling</a></p>
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4 changes: 2 additions & 2 deletions docs/function/bootstrp.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-16"/>
<meta name="date" content="2024-05-17"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
Expand Down Expand Up @@ -128,7 +128,7 @@ <h2>bootstrp</h2>
vs. Smoothing; Proceedings of the Section on Statistics & the
Environment. Alexandria, VA: American Statistical Association.

bootstrp (version 2024.04.23)
bootstrp (version 2024.05.15)
Author: Andrew Charles Penn
https://www.researchgate.net/profile/Andrew_Penn/

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