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Merge pull request ESCOMP#1160 from nusbaume/atmos_phys_dirs

cam6_4_040: Bring in re-organized atmospheric_physics repo

ESCOMP commit: a12dd47
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nusbaume authored and Steve Goldhaber committed Oct 16, 2024
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73 changes: 72 additions & 1 deletion doc/ChangeLog
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===============================================================

Tag name: cam6_4_040
Originator(s): nusbaume
Date: Oct 2, 2024
One-line Summary: Bring in re-organized atmospheric_physics repo
Github PR URL: https://github.com/ESCOMP/CAM/pull/1160

Purpose of changes (include the issue number and title text for each relevant
GitHub issue):

Fixes #1156 -> Modify CAM build system to handle re-organized
atmospheric_physics repo

Describe any changes made to build system:

Updated the 'configure' script to use the new atmospheric_physics directory
locations

Describe any changes made to the namelist: N/A

List any changes to the defaults for the boundary datasets: N/A

Describe any substantial timing or memory changes: N/A

Code reviewed by:

List all files eliminated: N/A

List all files added and what they do: N/A

List all existing files that have been modified, and describe the changes:
M .gitmodules
- Update the atmos_phys external

M bld/configure
- Update atmos_phys paths to correctly point to new source code locations

If there were any failures reported from running test_driver.sh on any test
platform, and checkin with these failures has been OK'd by the gatekeeper,
then copy the lines from the td.*.status files for the failed tests to the
appropriate machine below. All failed tests must be justified.

derecho/intel/aux_cam:

ERP_Ln9.f09_f09_mg17.FCSD_HCO.derecho_intel.cam-outfrq9s (Overall: FAIL)
SMS_Ld1.f09_f09_mg17.FCHIST_GC.derecho_intel.cam-outfrq1d (Overall: DIFF)
- pre-existing failure due to HEMCO not having reproducible results issues #1018 and #856

ERP_Ln9_P24x3.f45_f45_mg37.QPWmaC6.derecho_intel.cam-outfrq9s_mee_fluxes (Overall: PEND)
ERS_Ld3.f10_f10_mg37.F1850.derecho_intel.cam-outfrq1d_14dec_ghg_cam7 (Overall: PEND)
ERS_Ln9_P36x1.mpasa480_mpasa480.F2000climo.derecho_intel.cam-outfrq9s_mpasa480 (Overall: PEND)
SMS_Lm13.f10_f10_mg37.F2000climo.derecho_intel.cam-outfrq1m (Overall: PEND)
- Running into resource limits due to being switched to run in the 'develop' queue rather than 'main'
- Should be fixed in future CIME/ccs_config update.

SMS_D_Ln9.f19_f19_mg17.FXHIST.derecho_intel.cam-outfrq9s_amie (Overall: FAIL)
SMS_D_Ln9_P1280x1.ne0CONUSne30x8_ne0CONUSne30x8_mt12.FCHIST.derecho_intel.cam-outfrq9s (Overall: PEND)
- build-namelist error requiring CLM/CTSM external update.

derecho/nvhpc/aux_cam: ALL PASS

izumi/nag/aux_cam:

DAE.f45_f45_mg37.FHS94.izumi_nag.cam-dae (Overall: FAIL)
- pre-existing failure - issue #670

izumi/gnu/aux_cam: ALL PASS

Summarize any changes to answers: bit-for-bit

===============================================================

Tag name: cam6_4_039
Originator(s): eaton
Date: 10 October 2024
Expand Down Expand Up @@ -48,7 +119,7 @@ cime_config/SystemTests/plb.py
cime_config/SystemTests/sub.py
cime_config/SystemTests/sct.py
cime_config/SystemTests/tmc.py
. 'from CIME.utils import append_testlog' changed to
. 'from CIME.utils import append_testlog' changed to
'from CIME.status import append_testlog'

test/system/test_driver.sh
Expand Down

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