Deps: Bump the python-packages group across 1 directory with 7 updates

[dependabot]

Bumps the python-packages group with 7 updates in the / directory:

Package	From	To
sqlalchemy	2.0.30	2.0.31
psycopg	3.1.19	3.2.1
coverage	7.5.3	7.6.0
mypy	1.10.0	1.10.1
ruff	0.4.9	0.5.2
tenacity	8.3.0	8.5.0
tomlkit	0.12.5	0.13.0

Updates sqlalchemy from 2.0.30 to 2.0.31

Release notes

Sourced from sqlalchemy's releases.

2.0.31

Released: June 18, 2024

general

• [general] [bug] Set up full Python 3.13 support to the extent currently possible, repairing issues within internal language helpers as well as the serializer extension module.

  References: #11417

orm

• [orm] [usecase] Added missing parameter _orm.with_polymorphic.name that allows specifying the name of returned _orm.AliasedClass.

  References: #11361

• [orm] [bug] Fixed issue where a MetaData collection would not be serializable, if an Enum or Boolean datatype were present which had been adapted. This specific scenario in turn could occur when using the Enum or Boolean within ORM Annotated Declarative form where type objects frequently get copied.

  References: #11365

• [orm] [bug] Fixed issue where the _orm.selectinload() and _orm.subqueryload() loader options would fail to take effect when made against an inherited subclass that itself included a subclass-specific _orm.Mapper.with_polymorphic setting.

  References: #11446

• [orm] [bug] Fixed very old issue involving the _orm.joinedload.innerjoin parameter where making use of this parameter mixed into a query that also included joined eager loads along a self-referential or other cyclical relationship, along with complicating factors like inner joins added for secondary tables and such, would have the chance of splicing a particular inner join to the wrong part of the query. Additional state has been added to the internal method that does this splice to make a better decision as to where splicing should proceed.

  References: #11449

• [orm] [bug] [regression] Fixed bug in ORM Declarative where the __table__ directive could not be declared as a class function with _orm.declared_attr() on a superclass, including an __abstract__ class as well as coming from the

... (truncated)

Commits

• See full diff in compare view

Updates psycopg from 3.1.19 to 3.2.1

Changelog

Sourced from psycopg's changelog.

.. currentmodule:: psycopg

.. index:: single: Release notes single: News

psycopg release notes

Future releases

Psycopg 3.2.2 (unreleased) ^^^^^^^^^^^^^^^^^^^^^^^^^^

• Drop !TypeDef specifications as string from public modules, as they cannot be composed by users as !typing objects previously could (:ticket:[#860](https://github.com/psycopg/psycopg/issues/860)).

Current release

Psycopg 3.2.1 ^^^^^^^^^^^^^

• Fix packaging metadata breaking [c], [binary] dependencies (:ticket:[#853](https://github.com/psycopg/psycopg/issues/853)).

Psycopg 3.2

.. rubric:: New top-level features

• Add support for integer, floating point, boolean NumPy scalar types__ (:ticket:[#332](https://github.com/psycopg/psycopg/issues/332)).
• Add !timeout and !stop_after parameters to Connection.notifies() (:ticket:340).
• Allow dumpers to return !None, to be converted to NULL (:ticket:[#377](https://github.com/psycopg/psycopg/issues/377)).
• Add :ref:raw-query-cursors to execute queries using placeholders in PostgreSQL format ($1, $2...) (:tickets:[#560](https://github.com/psycopg/psycopg/issues/560), [#839](https://github.com/psycopg/psycopg/issues/839)).
• Add capabilities object to :ref:inspect the libpq capabilities <capabilities> (:ticket:[#772](https://github.com/psycopg/psycopg/issues/772)).
• Add ~rows.scalar_row to return scalar values from a query (:ticket:[#723](https://github.com/psycopg/psycopg/issues/723)).
• Add ~Connection.cancel_safe() for encrypted and non-blocking cancellation when using libpq v17. Use such method internally to implement !KeyboardInterrupt and ~cursor.copy termination (:ticket:[#754](https://github.com/psycopg/psycopg/issues/754)).
• The !context parameter of sql objects ~sql.Composable.as_string() and ~sql.Composable.as_bytes() methods is now optional (:ticket:[#716](https://github.com/psycopg/psycopg/issues/716)).
• Add ~Connection.set_autocommit() on sync connections, and similar

... (truncated)

Commits

• bb47d39 chore: bump psycopg package version to 3.2.1
• 55490a2 fix: fix versions in packaging metadata
• 1cbc42a docs: fix title level of major releases
• 06a6e5e docs: mention dropping Python 3.7 in psycopg 3.2 release
• ea3735d docs: better organization of the 3.2 release notes
• 896eee2 chore: bump psycopg package version to 3.2.0
• 2e2f4d7 chore: bump psycopg package version to 3.1.20
• 7369d3b Merge pull request #846 from eli-schwartz/tomllib
• 6672c70 style: shorter line in pyproject.toml
• a517bb4 build: avoid installing tomli on recent python
• Additional commits viewable in compare view

Updates coverage from 7.5.3 to 7.6.0

Changelog

Sourced from coverage's changelog.

Version 7.6.0 — 2024-07-11

• Exclusion patterns can now be multi-line, thanks to Daniel Diniz <pull 1807_>. This enables many interesting exclusion use-cases, including those requested in issues 118 <issue 118_> (entire files), 996 <issue 996_>_ (multiple lines only when appearing together), 1741 <issue 1741_>_ (remainder of a function), and 1803 <issue 1803_>_ (arbitrary sequence of marked lines). See the :ref:multi_line_exclude section of the docs for more details and examples.

• The JSON report now includes per-function and per-class coverage information. Thanks to Daniel Diniz <pull 1809_>_ for getting the work started. This closes issue 1793_ and issue 1532_.

• Fixed an incorrect calculation of "(no class)" lines in the HTML classes report.

• Python 3.13.0b3 is supported.

.. _issue 118: nedbat/coveragepy#118 .. _issue 996: nedbat/coveragepy#996 .. _issue 1532: nedbat/coveragepy#1532 .. _issue 1741: nedbat/coveragepy#1741 .. _issue 1793: nedbat/coveragepy#1793 .. _issue 1803: nedbat/coveragepy#1803 .. _pull 1807: nedbat/coveragepy#1807 .. _pull 1809: nedbat/coveragepy#1809

.. _changes_7-5-4:

Version 7.5.4 — 2024-06-22

• If you attempt to combine statement coverage data with branch coverage data, coverage.py used to fail with the message "Can't combine arc data with line data" or its reverse, "Can't combine line data with arc data." These messages used internal terminology, making it hard for people to understand the problem. They are now changed to mention "branch coverage data" and "statement coverage data."

• Fixed a minor branch coverage problem with wildcard match/case cases using names or guard clauses.

• Started testing on 3.13 free-threading (nogil) builds of Python. I'm not claiming full support yet. Closes issue 1799_.

.. _issue 1799: nedbat/coveragepy#1799

... (truncated)

Commits

• 59a3cd7 docs: sample HTML for 7.6.0
• 7f27fa7 docs: prep for 7.6.0
• 6a268b0 docs: issues closed by the json region reporting
• 5bfe9e7 chore: bump actions/setup-python from 5.1.0 to 5.1.1 (#1814)
• ab609ef docs: mention json region reporting in the changes
• 92d96b9 fix: json report needs 'no class' and 'no function' also
• e47e7e7 refactor: move duplicate code into methods
• 3d6be2b fix: json format should bump for regions
• a9992d2 test: add a test of json regions with branches
• 8b89764 test: json expectations should have explicit format number
• Additional commits viewable in compare view

Updates mypy from 1.10.0 to 1.10.1

Changelog

Sourced from mypy's changelog.

Mypy 1.10.1

• Fix error reporting on cached run after uninstallation of third party library (Shantanu, PR 17420)

Acknowledgements

Thanks to all mypy contributors who contributed to this release:

• Alex Waygood
• Ali Hamdan
• Edward Paget
• Evgeniy Slobodkin
• Hashem
• hesam
• Hugo van Kemenade
• Ihor
• James Braza
• Jelle Zijlstra
• jhance
• Jukka Lehtosalo
• Loïc Simon
• Marc Mueller
• Matthieu Devlin
• Michael R. Crusoe
• Nikita Sobolev
• Oskari Lehto
• Riccardo Di Maio
• Richard Si
• roberfi
• Roman Solomatin
• Sam Xifaras
• Shantanu
• Spencer Brown
• Srinivas Lade
• Tamir Duberstein
• youkaichao

I’d also like to thank my employer, Dropbox, for supporting mypy development.

Mypy 1.9

We’ve just uploaded mypy 1.9 to the Python Package Index (PyPI). Mypy is a static type checker for Python. This release includes new features, performance improvements and bug fixes. You can install it as follows:

python3 -m pip install -U mypy

You can read the full documentation for this release on Read the Docs.

Breaking Changes

Because the version of typeshed we use in mypy 1.9 doesn't support 3.7, neither does mypy 1.9. (Jared Hance, PR 16883)

... (truncated)

Commits

• c28b525 [1.10 backport] Fix error reporting on cached run after uninstallation of thi...
• See full diff in compare view

Updates ruff from 0.4.9 to 0.5.2

Release notes

Sourced from ruff's releases.

0.5.2

Release Notes

Preview features

• Use space separator before parenthesized expressions in comprehensions with leading comments (#12282)
• [flake8-async] Update ASYNC100 to include anyio and asyncio (#12221)
• [flake8-async] Update ASYNC109 to include anyio and asyncio (#12236)
• [flake8-async] Update ASYNC110 to include anyio and asyncio (#12261)
• [flake8-async] Update ASYNC115 to include anyio and asyncio (#12262)
• [flake8-async] Update ASYNC116 to include anyio and asyncio (#12266)

Rule changes

• [flake8-return] Exempt properties from explicit return rule (RET501) (#12243)
• [numpy] Add np.NAN-to-np.nan diagnostic (#12292)
• [refurb] Make list-reverse-copy an unsafe fix (#12303)

Server

• Consider include and extend-include settings in native server (#12252)
• Include nested configurations in settings reloading (#12253)

CLI

• Omit code frames for fixes with empty ranges (#12304)
• Warn about formatter incompatibility for D203 (#12238)

Bug fixes

• Make cache-write failures non-fatal on Windows (#12302)
• Treat not operations as boolean tests (#12301)
• [flake8-bandit] Avoid S310 violations for HTTP-safe f-strings (#12305)
• [flake8-bandit] Support explicit string concatenations in S310 HTTP detection (#12315)
• [flake8-bandit] fix S113 false positive for httpx without timeout argument (#12213)
• [pycodestyle] Remove "non-obvious" allowance for E721 (#12300)
• [pyflakes] Consider with blocks as single-item branches for redefinition analysis (#12311)
• [refurb] Restrict forwarding for newline argument in open() calls to Python versions >= 3.10 (#12244)

Documentation

• Update help and documentation to reflect --output-format full default (#12248)

Performance

• Use more threads when discovering Python files (#12258)

Install ruff 0.5.2

Install prebuilt binaries via shell script

... (truncated)

Changelog

Sourced from ruff's changelog.

0.5.2

Preview features

• Use space separator before parenthesized expressions in comprehensions with leading comments (#12282)
• [flake8-async] Update ASYNC100 to include anyio and asyncio (#12221)
• [flake8-async] Update ASYNC109 to include anyio and asyncio (#12236)
• [flake8-async] Update ASYNC110 to include anyio and asyncio (#12261)
• [flake8-async] Update ASYNC115 to include anyio and asyncio (#12262)
• [flake8-async] Update ASYNC116 to include anyio and asyncio (#12266)

Rule changes

• [flake8-return] Exempt properties from explicit return rule (RET501) (#12243)
• [numpy] Add np.NAN-to-np.nan diagnostic (#12292)
• [refurb] Make list-reverse-copy an unsafe fix (#12303)

Server

• Consider include and extend-include settings in native server (#12252)
• Include nested configurations in settings reloading (#12253)

CLI

• Omit code frames for fixes with empty ranges (#12304)
• Warn about formatter incompatibility for D203 (#12238)

Bug fixes

• Make cache-write failures non-fatal on Windows (#12302)
• Treat not operations as boolean tests (#12301)
• [flake8-bandit] Avoid S310 violations for HTTP-safe f-strings (#12305)
• [flake8-bandit] Support explicit string concatenations in S310 HTTP detection (#12315)
• [flake8-bandit] fix S113 false positive for httpx without timeout argument (#12213)
• [pycodestyle] Remove "non-obvious" allowance for E721 (#12300)
• [pyflakes] Consider with blocks as single-item branches for redefinition analysis (#12311)
• [refurb] Restrict forwarding for newline argument in open() calls to Python versions >= 3.10 (#12244)

Documentation

• Update help and documentation to reflect --output-format full default (#12248)

Performance

• Use more threads when discovering Python files (#12258)

0.5.1

Preview features

... (truncated)

Commits

• dc8db1a Make some amendments to the v0.5.2 changelog (#12319)
• 18c364d [flake8-bandit] Support explicit string concatenations in S310 HTTP detecti...
• 7a7c601 Bump version to v0.5.2 (#12316)
• 3bfbbbc Avoid allocation when validating HTTP and HTTPS prefixes (#12313)
• 1a3ee45 [flake8-bandit] Avoid S310 violations for HTTP-safe f-strings (#12305)
• 6584886 [refurb] Make list-reverse-copy an unsafe fix (#12303)
• 456d6a2 Consider with blocks as single-item branches (#12311)
• 940df67 Omit code frames for fixes with empty ranges (#12304)
• e58713e Make cache-write failures non-fatal (#12302)
• aa5c53b Remove 'non-obvious' allowance for E721 (#12300)
• Additional commits viewable in compare view

Updates tenacity from 8.3.0 to 8.5.0

Release notes

Sourced from tenacity's releases.

8.5.0

What's Changed

• fix: Restore contents of retry attribute for wrapped functions by @​hasier in jd/tenacity#484

Full Changelog: jd/tenacity@8.4.2...8.5.0

tenacity 8.4.2

What's Changed

• fix: Avoid overwriting local contexts with retry decorator by @​hasier in jd/tenacity#479

Full Changelog: jd/tenacity@8.4.1...8.4.2

tenacity 8.4.1

What's Changed

• Include tenacity.asyncio subpackage in release dist by @​cdce8p in jd/tenacity#474

Full Changelog: jd/tenacity@8.4.0...8.4.1

tenacity 8.4.0

What's Changed

• Add async strategies by @​hasier in jd/tenacity#451
• Support Trio out-of-the-box by @​jakkdl in jd/tenacity#463

Full Changelog: jd/tenacity@8.3.0...8.4.0

Commits

• 31fe2d0 fix: Restore contents of retry attribute for wrapped functions (#484)
• 33cd0e1 chore(deps): bump actions/checkout in the github-actions group (#483)
• a15fa64 fix: Avoid overwriting local contexts with retry decorator (#479)
• ee6a8f7 Include tenacity.asyncio subpackage in release dist (#474)
• 702014b ci: add support for trio in Mergify automerge (#470)
• ade0567 Support Trio out-of-the-box, take 2 (#463)
• 952189b Update index.rst: Remove * (#465)
• 5b00c15 chore(deps): bump the github-actions group across 1 directory with 2 updates ...
• 21137e7 Add async strategies (#451)
• See full diff in compare view

Updates tomlkit from 0.12.5 to 0.13.0

Release notes

Sourced from tomlkit's releases.

0.13.0

What's Changed

• fix: Test failures with Python 3.13.0a4: test_dates_behave_like_dates and test_times_behave_like_times by @​frostming in python-poetry/tomlkit#349
• [pre-commit.ci] pre-commit autoupdate by @​pre-commit-ci in python-poetry/tomlkit#350
• fix: Revert "fix: Construction of OutOfOrderTableProxy can cause newlines to be inserted (#347)" by @​frostming in python-poetry/tomlkit#353
• [pre-commit.ci] pre-commit autoupdate by @​pre-commit-ci in python-poetry/tomlkit#354
• Update tests action by @​waketzheng in python-poetry/tomlkit#357
• fix: tomlkit 0.12.5 : Encoder contract interferes with external TypeErrors raised in encoders by @​frostming in python-poetry/tomlkit#358
• [pre-commit.ci] pre-commit autoupdate by @​pre-commit-ci in python-poetry/tomlkit#359
• chore(deps-dev): bump certifi from 2024.2.2 to 2024.7.4 by @​dependabot in python-poetry/tomlkit#362
• chore(deps-dev): bump urllib3 from 2.0.7 to 2.2.2 by @​dependabot in python-poetry/tomlkit#363
• chore(deps-dev): bump requests from 2.31.0 to 2.32.2 by @​dependabot in python-poetry/tomlkit#364
• chore(deps-dev): bump zipp from 3.15.0 to 3.19.1 by @​dependabot in python-poetry/tomlkit#365
• fix: keep the nested out of order table by @​frostming in python-poetry/tomlkit#366

New Contributors

• @​waketzheng made their first contribution in python-poetry/tomlkit#357

Full Changelog: python-poetry/tomlkit@0.12.5...0.13.0

Changelog

Sourced from tomlkit's changelog.

[0.13.0] - 2024-07-10

Changed

• Expect a tomlkit-specific error instead of TypeError from a custom encoder. (#355)
• Drop support for Python older than 3.8. Remove 3.7 from the CI matrix.

Fixed

• Fix the incompatiblity with 3.13 because of the datetime.replace() change. (#333)
• Revert the change of parsing out-of-order tables. (#347)
• Keep the nested out-of-order table. (#361)

Commits

• 4d06dff chore: bump version to 0.13.0
• 85aaf7a fix: keep the nested out of order table (#366)
• f12ece3 chore(deps-dev): bump zipp from 3.15.0 to 3.19.1 (#365)
• f4b2f74 chore(deps-dev): bump requests from 2.31.0 to 2.32.2 (#364)
• 0747884 chore(deps-dev): bump urllib3 from 2.0.7 to 2.2.2 (#363)
• d55d837 fix: Remove 3.7 from the CI matrix
• 49daa69 chore(deps-dev): bump certifi from 2024.2.2 to 2024.7.4 (#362)
• cce567c [pre-commit.ci] pre-commit autoupdate (#359)
• 400057b fix: tomlkit 0.12.5 : Encoder contract interferes with external TypeError...
• 22676f9 Update tests action (#357)
• Additional commits viewable in compare view

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