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remove reference to script version
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malachig committed Apr 25, 2024
1 parent a76ba87 commit 8d104e6
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5 changes: 3 additions & 2 deletions _posts/0003-03-03-Differential_Expression-DESeq2.md
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Expand Up @@ -62,7 +62,7 @@ Launch R:
R
```

R code has been provided below. If you wish to have a script with all of the code, it can be found [here](https://github.com/griffithlab/rnabio.org/blob/master/assets/scripts/Tutorial_DESeq2.R). Run the R commands below.
R code has been provided below for a demonstration analysis with DESeq2 comparing the UHR and HBR samples (three replicates each).

```R

Expand Down Expand Up @@ -205,6 +205,7 @@ fwrite(deGeneResultSorted, file='DE_all_genes_DESeq2.tsv', sep="\t")
fwrite(deGeneResultSignificant, file='DE_sig_genes_DESeq2.tsv', sep="\t")

#To exit R type the following
quit(save="no")
#quit(save="no")

```

57 changes: 0 additions & 57 deletions assets/scripts/Tutorial_DESeq2.R

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