Remove old changelog and add Markdown changelog

guigolab · Nov 13, 2017 · 7b5316c · 7b5316c
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diff --git a/CHANGELOG b/CHANGELOG
diff --git a/CHANGELOG.md b/CHANGELOG.md
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+# GRAPE-nf Changelog
+
+## Version 0.2.0
+
+- Added ability to resolve relative paths in the index file against its current location
+- Change default profile to `starrsem`
+- Set bamSort to `samtools` in default profile
+- Fixed Empty lines in the index file result in a `ArrayIndexOutOfBoundsException` #7
+- Update documentation - resolve #6
+- Add genomeIndex parameter - fix #9
+- Add samtools index to mergeBam command template
+- Add mapping templates for `STAR 2.5`
+- Fix input BAMs considered as paired-end - resolve #14
+- Fix error when using both Genome and Transcriptome bams as inputs - fix #13
+- Enable trace by default in nextflow config
+
+## Version 0.1.0
+
+First version