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Version 0.2.0

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@emi80 emi80 released this 13 Nov 10:11
· 239 commits to master since this release
  • Added ability to resolve relative paths in the index file against its current location
  • Change default profile to starrsem
  • Set bamSort to samtools in default profile
  • Fixed Empty lines in the index file result in a ArrayIndexOutOfBoundsException #7
  • Update documentation - resolve #6
  • Add genomeIndex parameter - fix #9
  • Add samtools index to mergeBam command template
  • Add mapping templates for STAR 2.5
  • Fix input BAMs considered as paired-end - resolve #14
  • Fix error when using both Genome and Transcriptome bams as inputs - fix #13
  • Enable trace by default in nextflow config

Full Changelog: v0.1.0...v0.2.0