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tomgreen66 committed Feb 19, 2024
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1 change: 1 addition & 0 deletions _sources/index.rst.txt
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:maxdepth: 1
:caption: Applications

applications/arepo
applications/covidsim
applications/dedalus
applications/dlmonte
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="dlmonte.html">DL_MONTE 2</a></li>
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24 changes: 21 additions & 3 deletions applications/arepo.html
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<script src="../_static/sphinx_highlight.js?v=dc90522c"></script>
<script src="../_static/js/theme.js"></script>
<link rel="index" title="Index" href="../genindex.html" />
<link rel="search" title="Search" href="../search.html" />
<link rel="search" title="Search" href="../search.html" />
<link rel="next" title="CovidSim" href="covidsim.html" />
<link rel="prev" title="gdb4hpc" href="../tools/gdb4hpc.html" />
</head>

<body class="wy-body-for-nav">
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<li class="toctree-l1"><a class="reference internal" href="../tools/gdb4hpc.html">gdb4hpc</a></li>
</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<ul class="current">
<li class="toctree-l1 current"><a class="current reference internal" href="#">Arepo</a><ul>
<li class="toctree-l2"><a class="reference internal" href="#useful-links">Useful links</a></li>
<li class="toctree-l2"><a class="reference internal" href="#licensing">Licensing</a></li>
<li class="toctree-l2"><a class="reference internal" href="#version">Version</a></li>
<li class="toctree-l2"><a class="reference internal" href="#building">Building</a></li>
<li class="toctree-l2"><a class="reference internal" href="#running">Running</a><ul>
<li class="toctree-l3"><a class="reference internal" href="#example-job-submission-script">Example Job Submission Script</a></li>
<li class="toctree-l3"><a class="reference internal" href="#arm">Arm</a></li>
<li class="toctree-l3"><a class="reference internal" href="#notes">Notes</a></li>
</ul>
</li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="dlmonte.html">DL_MONTE 2</a></li>
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</div>
</div>
<footer>
<footer><div class="rst-footer-buttons" role="navigation" aria-label="Footer">
<a href="../tools/gdb4hpc.html" class="btn btn-neutral float-left" title="gdb4hpc" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
<a href="covidsim.html" class="btn btn-neutral float-right" title="CovidSim" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right" aria-hidden="true"></span></a>
</div>

<hr/>

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1 change: 1 addition & 0 deletions applications/castep.html
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="dlmonte.html">DL_MONTE 2</a></li>
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5 changes: 3 additions & 2 deletions applications/covidsim.html
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<link rel="index" title="Index" href="../genindex.html" />
<link rel="search" title="Search" href="../search.html" />
<link rel="next" title="Dedalus" href="dedalus.html" />
<link rel="prev" title="gdb4hpc" href="../tools/gdb4hpc.html" />
<link rel="prev" title="Arepo" href="arepo.html" />
</head>

<body class="wy-body-for-nav">
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul class="current">
<li class="toctree-l1"><a class="reference internal" href="arepo.html">Arepo</a></li>
<li class="toctree-l1 current"><a class="current reference internal" href="#">CovidSim</a><ul>
<li class="toctree-l2"><a class="reference internal" href="#useful-links">Useful links</a></li>
<li class="toctree-l2"><a class="reference internal" href="#versions">Versions</a></li>
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</div>
</div>
<footer><div class="rst-footer-buttons" role="navigation" aria-label="Footer">
<a href="../tools/gdb4hpc.html" class="btn btn-neutral float-left" title="gdb4hpc" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
<a href="arepo.html" class="btn btn-neutral float-left" title="Arepo" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
<a href="dedalus.html" class="btn btn-neutral float-right" title="Dedalus" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right" aria-hidden="true"></span></a>
</div>

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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="dlmonte.html">DL_MONTE 2</a></li>
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul class="current">
<li class="toctree-l1"><a class="reference internal" href="arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="covidsim.html">CovidSim</a></li>
<li class="toctree-l1 current"><a class="current reference internal" href="#">Dedalus</a><ul>
<li class="toctree-l2"><a class="reference internal" href="#useful-links">Useful links</a></li>
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul class="current">
<li class="toctree-l1"><a class="reference internal" href="arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="dedalus.html">Dedalus</a></li>
<li class="toctree-l1 current"><a class="current reference internal" href="#">DL_MONTE 2</a><ul>
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul class="current">
<li class="toctree-l1"><a class="reference internal" href="arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="dlmonte.html">DL_MONTE 2</a></li>
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1 change: 1 addition & 0 deletions applications/gromacs.html
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul class="current">
<li class="toctree-l1"><a class="reference internal" href="arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="dlmonte.html">DL_MONTE 2</a></li>
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1 change: 1 addition & 0 deletions applications/hydro3d.html
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="dlmonte.html">DL_MONTE 2</a></li>
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1 change: 1 addition & 0 deletions applications/molpro.html
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="dlmonte.html">DL_MONTE 2</a></li>
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1 change: 1 addition & 0 deletions applications/namd.html
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="dlmonte.html">DL_MONTE 2</a></li>
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1 change: 1 addition & 0 deletions applications/nemo.html
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="dlmonte.html">DL_MONTE 2</a></li>
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1 change: 1 addition & 0 deletions applications/openfoam.html
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul class="current">
<li class="toctree-l1"><a class="reference internal" href="arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="dlmonte.html">DL_MONTE 2</a></li>
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1 change: 1 addition & 0 deletions applications/opensbli.html
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="dlmonte.html">DL_MONTE 2</a></li>
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1 change: 1 addition & 0 deletions applications/orca.html
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul class="current">
<li class="toctree-l1"><a class="reference internal" href="arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="dlmonte.html">DL_MONTE 2</a></li>
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1 change: 1 addition & 0 deletions applications/um.html
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="dlmonte.html">DL_MONTE 2</a></li>
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul class="current">
<li class="toctree-l1"><a class="reference internal" href="arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="dlmonte.html">DL_MONTE 2</a></li>
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1 change: 1 addition & 0 deletions genindex.html
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="applications/arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="applications/covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="applications/dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="applications/dlmonte.html">DL_MONTE 2</a></li>
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2 changes: 2 additions & 0 deletions index.html
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="applications/arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="applications/covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="applications/dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="applications/dlmonte.html">DL_MONTE 2</a></li>
Expand Down Expand Up @@ -245,6 +246,7 @@ <h2>Acknowledging Isambard<a class="headerlink" href="#acknowledging-isambard" t
<div class="toctree-wrapper compound">
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="applications/arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="applications/covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="applications/dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="applications/dlmonte.html">DL_MONTE 2</a></li>
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../applications/arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/dlmonte.html">DL_MONTE 2</a></li>
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../applications/arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/dlmonte.html">DL_MONTE 2</a></li>
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../applications/arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/dlmonte.html">DL_MONTE 2</a></li>
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1 change: 1 addition & 0 deletions search.html
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="applications/arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="applications/covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="applications/dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="applications/dlmonte.html">DL_MONTE 2</a></li>
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1 change: 1 addition & 0 deletions tools/ddt.html
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../applications/arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/dlmonte.html">DL_MONTE 2</a></li>
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5 changes: 3 additions & 2 deletions tools/gdb4hpc.html
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<script src="../_static/js/theme.js"></script>
<link rel="index" title="Index" href="../genindex.html" />
<link rel="search" title="Search" href="../search.html" />
<link rel="next" title="CovidSim" href="../applications/covidsim.html" />
<link rel="next" title="Arepo" href="../applications/arepo.html" />
<link rel="prev" title="Arm DDT" href="ddt.html" />
</head>

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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../applications/arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/dlmonte.html">DL_MONTE 2</a></li>
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</div>
<footer><div class="rst-footer-buttons" role="navigation" aria-label="Footer">
<a href="ddt.html" class="btn btn-neutral float-left" title="Arm DDT" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
<a href="../applications/covidsim.html" class="btn btn-neutral float-right" title="CovidSim" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right" aria-hidden="true"></span></a>
<a href="../applications/arepo.html" class="btn btn-neutral float-right" title="Arepo" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right" aria-hidden="true"></span></a>
</div>

<hr/>
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../applications/arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/dlmonte.html">DL_MONTE 2</a></li>
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../applications/arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/dlmonte.html">DL_MONTE 2</a></li>
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Original file line number Diff line number Diff line change
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</ul>
<p class="caption" role="heading"><span class="caption-text">Applications</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../applications/arepo.html">Arepo</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/covidsim.html">CovidSim</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/dedalus.html">Dedalus</a></li>
<li class="toctree-l1"><a class="reference internal" href="../applications/dlmonte.html">DL_MONTE 2</a></li>
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