Cert Renewal script#14667

Closed

nevoodoo wants to merge 773 commits intohail-is:mainfrom populationgenomics:cert-renewal-script

+1,143-97

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Commits on May 13, 2022

[copy] fix the TimeoutError and ServerDisconnected issues in copy

Daniel King
authored and
vladsavelyev
committed
remove pylints

Daniel King
authored and
vladsavelyev
committed
more pylints

Daniel King
authored and
vladsavelyev
committed
Merge pull request #195 from populationgenomics/merge-fix-gcs-copy
vladsavelyev
authored

Commits on May 17, 2022

Commits on May 31, 2022

Merge pull request #197 from populationgenomics/pool-name
lgruen
authored

Commits on Jun 1, 2022

Commits on Jun 2, 2022

Second attempt at enabling Spot VMs on GCP (#200 )
lgruen
authored

Commits on Jun 29, 2022

Commits on Jul 4, 2022

Put deployment-specific files into $ORGANIZATION_DOMAIN subdirectory (#202 )
lgruen
authored

Commits on Jul 11, 2022

Merge commit 'c9e540b7988a7f575a5daf59b0e24b4fe506f146' into upstream
illusional
committed

Commits on Jul 12, 2022

Commits on Jul 20, 2022

Remove subdomains for services that we don't deploy (#210 )
lgruen
authored

Commits on Jul 21, 2022

Add pool_recycle parameter to database creation to avoid stale connections (#211 )
lgruen
authored

Commits on Aug 12, 2022

Commits on Aug 22, 2022

Allow overriding the temp bucket for Dataproc (#217 )
lgruen
authored

Commits on Aug 24, 2022

Cherry-pick GKE autoprovisioning change (#218 )
lgruen
authored

Commits on Aug 31, 2022

Commits on Sep 1, 2022

Merge pull request #221 from populationgenomics/v0.2.98-upstream2
illusional
authored

Commits on Sep 13, 2022

Merge remote-tracking branch 'upstream/main' into v0.2.98-upstream3
vladsavelyev
committed

Commits on Sep 14, 2022

Merge pull request #222 from populationgenomics/v0.2.98-upstream3
vladsavelyev
authored

Commits on Sep 21, 2022

Commits on Sep 28, 2022

Commits on Sep 29, 2022

Commits on Oct 6, 2022

Commits on Oct 7, 2022

Commits on Oct 9, 2022

Add debugging compiler stack trace for Tim Poterba (#235 )
lgruen
authored

Commits on Oct 10, 2022

Commits on Oct 12, 2022

Commits on Oct 13, 2022

Commits on Oct 16, 2022

Better QoB error propagation (patch from Tim Poterba) (#242 )
lgruen
authored

Commits on Oct 17, 2022

Commits on Nov 22, 2022

Commits on Nov 27, 2022

Commits on Nov 28, 2022

Commits on Nov 29, 2022

Fix (#254 )
vladsavelyev
authored

Commits on Nov 30, 2022

Deploy the hailtop image (#255 )
lgruen
authored

Commits on Dec 1, 2022

[dataproc] fix pyfiles (#256 )
vladsavelyev
authored

Commits on Dec 14, 2022

Commits on Dec 16, 2022

Commits on Jan 19, 2023

Merge pull request #241 from populationgenomics/azure-ci-hook
violetbrina
authored

Commits on Jan 20, 2023

Restore printing of child batch URLs (#262 )
lgruen
authored

Commits on Jan 22, 2023

Conditional on not wait (#263 )
lgruen
authored

Commits on Feb 10, 2023

Commits on Feb 18, 2023

[query] fix NPE introduced in hail-is#12555 (hail-is#12711 ) (#267 )

lgruen
and
danking
authored

Commits on Feb 21, 2023

Add cost to job resource and upgrade to aggregated_resources_v2 (#268 )
illusional
authored

Commits on Mar 1, 2023

Commits on Mar 2, 2023

Commits on Mar 5, 2023

Add endpoint that fetches completed batches in order (#275 )
illusional
authored

Commits on Mar 7, 2023

[batch] downgrade gcsfuse to avoid gcsfuse bug (hail-is#12749 ) (#276 )

illusional
and
danking
authored

Commits on Mar 13, 2023

Revert "[query] MatrixBlockMatrixWriter can be lowered (hail-is#12695 )" (#279 )
lgruen
authored

Commits on Mar 16, 2023

FIX: missing comma, SQL syntax compromised causing 500 internal server error on node update (#280 )
violetbrina
authored

Commits on Apr 4, 2023

Don't write composite object for wheels (#281 )
lgruen
authored

Commits on Apr 12, 2023

Commits on Apr 19, 2023

Fix fail handling (#285 )
lgruen
authored

Commits on Apr 20, 2023

Merge tag '0.2.114' into upstream-0.2.114
lgruen
committed

Commits on Apr 21, 2023

Merge pull request #286 from populationgenomics/upstream-0.2.114
lgruen
authored

Commits on Apr 26, 2023

Merge tag '0.2.115' into upstream-0.2.115
lgruen
committed

Commits on May 2, 2023

Merge pull request #287 from populationgenomics/upstream-0.2.115
lgruen
authored

Commits on May 4, 2023

[services] indicate how many errors we have seen

Dan King
authored and
lgruen
committed
Merge pull request #288 from populationgenomics/retry-info
lgruen
authored

Commits on May 5, 2023

Commits on Jun 13, 2023

Commits on Sep 7, 2023

Commits on Sep 8, 2023

Commits on Sep 12, 2023

Commits on Sep 18, 2023

Address review feedback for bad merge
illusional
authored

Commits on Sep 19, 2023

Commits on Sep 25, 2023

Fix URLs to filter job states in a batch (#311 )
EddieLF
authored

Commits on Oct 4, 2023

[batch] Fix job cpu and memory recording (hail-is#13626 )

daniel-goldstein
authored and
illusional
committed

Commits on Oct 5, 2023

Commits on Oct 16, 2023

Make cost_breakdown optional (#315 )
illusional
authored

Commits on Oct 17, 2023

Allow prod_deploy to be hit by non-developer CI (#316 )
illusional
authored

Commits on Nov 9, 2023

Merge upstream HEAD (3b38d0b, 2023-11-10) for 0.2.126 and OOM fix
jmarshall
committed

Commits on Nov 13, 2023

Update fix-job-groups-state-enum.sql migration for CPG database state (#320 )

jmarshall
and
jigold
authored

Commits on Nov 14, 2023

Reorder to reduce the difference from upstream backend.py (#321 )
jmarshall
authored

Commits on Nov 15, 2023

Disable trial_bp to alleviate error during user creation (#322 )
illusional
authored

Commits on Dec 29, 2023

Merge pull request from GHSA-487p-qx68-5vjw

Dan King
authored and
illusional
committed
[auth] hd is not present for iam.gserviceaccount.com (hail-is#14114 )

danking
authored and
illusional
committed
Merge pull request #323 from populationgenomics/fix-org-claim
illusional
authored

Commits on Jan 3, 2024

Commits on Jan 5, 2024

Commits on Jan 8, 2024

Fix merge accident in recent auth bug fixes (#327 )
jmarshall
authored

Commits on Feb 1, 2024

Update completed endpoint with new job group format (#328 )
illusional
authored

Commits on Feb 22, 2024

Expose job resource in batch API (#329 )

illusional
and
jmarshall
authored

Commits on May 20, 2024

Commits on May 21, 2024

Commits on May 26, 2024

Try adding extra route to metadata server (#337 )
illusional
authored

Commits on May 27, 2024

Implement the .../service-accounts/.../scopes endpoint in metadata server (#338 )
jmarshall
authored

Commits on May 29, 2024

Commits on May 30, 2024

Update SQL reference to aggregated_job_resources_v2 with aggregated_job_resources_v3. (#341 )
milo-hyben
authored

Commits on Jun 11, 2024

Add pool label to "resource requests ... are unsatisfiable" message (#342 )
jmarshall
authored

Commits on Jul 9, 2024

Commits on Jul 10, 2024

Merge upstream release 0.2.132
jmarshall
committed

Commits on Jul 11, 2024

Merge pull request #344 from populationgenomics/upstream-0.2.132
jmarshall
authored

Commits on Jul 25, 2024

Fix for /api/v1alpha/batches/completed, picking only ROOT_JOB_GROUP when collecting batches and jobs. (#345 )
milo-hyben
authored

Commits on Aug 5, 2024

Add support for public-ip-address in dataproc (#346 )
illusional
authored

Commits on Aug 22, 2024

Added a cert renewal bash script
nevoodoo
committed