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Issues: hdmf-dev/hdmf-zarr
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[Feature]: Add tests for reading from S3 bucket with references
category: enhancement
improvements of code or code behavior
HDMF-Zarr 2025 Major Roadmap
category: proposal
proposed enhancements or new features
priority: medium
non-critical problem and/or affecting only a small set of users
Address warning during export: Could not determine source_object_id
category: enhancement
improvements of code or code behavior
priority: medium
non-critical problem and/or affecting only a small set of users
[Bug]: .specloc not saved in consolidated metadata
category: bug
errors in the code or code behavior
priority: medium
non-critical problem and/or affecting only a small set of users
[Bug]: Reading errors in the code or code behavior
priority: medium
non-critical problem and/or affecting only a small set of users
units
table is very slow when expanding electrodes
table
category: bug
[Feature]: Warn if writing a file that does not end in appropriate extension
category: enhancement
improvements of code or code behavior
priority: low
alternative solution already working and/or relevant to only specific user(s)
[Bug]: Cannot read remote files
category: bug
errors in the code or code behavior
priority: medium
non-critical problem and/or affecting only a small set of users
[Feature]: improve html representation of Zarr Arrays in NWB
category: enhancement
improvements of code or code behavior
priority: low
alternative solution already working and/or relevant to only specific user(s)
[Feature]: Rework export
priority: high
impacts proper operation or use of feature important to most users
[Bug]: error when validating ElectricalSeries in NWB Zarr file
category: bug
errors in the code or code behavior
[Bug]: validation error on NWB Zarr file
category: bug
errors in the code or code behavior
priority: medium
non-critical problem and/or affecting only a small set of users
[Bug]: datetimes in pynwb.validate on NWB Zarr
category: bug
errors in the code or code behavior
priority: low
alternative solution already working and/or relevant to only specific user(s)
[Bug]: NWB Zarr to HDMF export fails
category: bug
errors in the code or code behavior
priority: medium
non-critical problem and/or affecting only a small set of users
[Bug]: Reading and exporting Zarr NWB fails to copy over table information
category: bug
errors in the code or code behavior
priority: medium
non-critical problem and/or affecting only a small set of users
[Bug]: Writing NWB with errors in the code or code behavior
priority: low
alternative solution already working and/or relevant to only specific user(s)
experimenter
(or any ArrayLike[str]
) fails
category: bug
[Feature]: Explore use of Zarrita
category: proposal
proposed enhancements or new features
priority: low
alternative solution already working and/or relevant to only specific user(s)
[Feature]: Use proposed enhancements or new features
priority: medium
non-critical problem and/or affecting only a small set of users
topic: ZarrIO
Feature request related to the ZarrIO backend
copy_store
for copying existing zarr data
category: proposal
Zarr datasets info lack compression data
category: bug
errors in the code or code behavior
priority: low
alternative solution already working and/or relevant to only specific user(s)
[Bug]: errors in the code or code behavior
priority: medium
non-critical problem and/or affecting only a small set of users
topic: storage
issues related to storage schema and formats
export
fails to correctly save units after adding columns
category: bug
[Feature]: Write zarr without using pickle
category: enhancement
improvements of code or code behavior
priority: low
alternative solution already working and/or relevant to only specific user(s)
[Feature]: Test without consolidate metadata
category: enhancement
improvements of code or code behavior
priority: low
alternative solution already working and/or relevant to only specific user(s)
[Bug]: reading unit table arrays via string keys much slower than reading as properties
category: enhancement
improvements of code or code behavior
priority: low
alternative solution already working and/or relevant to only specific user(s)
[Documentation]: Add tutorial for S3 streaming
priority: medium
non-critical problem and/or affecting only a small set of users
topic: docs
Issues related to documentation
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