Remove unnecessary code

heiniglab · Oct 16, 2023 · 3b26a69 · 3b26a69
1 parent 1d40314
commit 3b26a69
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Showing 11 changed files with 53 additions and 8,675 deletions.
diff --git a/A/A1_Load_Cellranger_Data.ipynb b/A/A1_Load_Cellranger_Data.ipynb
@@ -1056,52 +1056,6 @@
     "##### For each library check out names of features / hashtags"
    ]
   },
-  {
-   "cell_type": "code",
-   "execution_count": 37,
-   "id": "87f62c22-3c28-4d52-b267-cd29a06cc6e3",
-   "metadata": {},
-   "outputs": [
-    {
-     "name": "stdout",
-     "output_type": "stream",
-     "text": [
-      "Index(['1.1', '2.1', 'S3', '4.1', '5.1', '6.1', '7.1', '8.1', '9.1', '10.1'], dtype='object')\n",
-      "Index(['12.1', '13.1', '14.1', '15.1', '16.1', '17.1', '18.1', '19.1'], dtype='object')\n",
-      "Index(['21.1', '22.1', '23.1', '25.1', '26.1', '27.1', '6.1'], dtype='object')\n",
-      "Index(['S1', '2.2', '3.2', '4.2', 'S5', '6.2', 'S7', '8.2', '9.2', '10.2'], dtype='object')\n",
-      "Index(['11.2', '12.2', '13.2', '14.2', '15.2', '16.2', '7.2', '18.2', '19.2',\n",
-      "       '20.2'],\n",
-      "      dtype='object')\n",
-      "Index(['21.2', '22.2', '23.2', '24.2', '25.2', '26.2', '27.2', '28.2', 'S9',\n",
-      "       '13.2'],\n",
-      "      dtype='object')\n",
-      "Index(['11.3', '2.3', '3.3', '4.3', '5.3', '6.3', '7.3', '8.3', '9.3', 'S10'], dtype='object')\n",
-      "Index(['13.3', '15.3', '18.3', '19.3', '20.3', '21.3', '22.3', '23.3', '24.3',\n",
-      "       '25.3'],\n",
-      "      dtype='object')\n",
-      "Index(['26.3', '27.3', '28.3', '26', '28', '33', '34', '10.3', 'S9', 'S10'], dtype='object')\n",
-      "Index(['2.4', '3.4', 'S3', '5.4', '6.4', '7.4', '8.4', '11.4', '13.4', '15.4'], dtype='object')\n",
-      "Index(['Ch-CCS-2', 'Ch-CCS-4', 'Ch-CCS-5', 'Ch-CCS-7', 'Ch-CCS-8', 'Ch-CCS-10',\n",
-      "       'Ch-CCS-14', 'Ch-CCS-15', 'Ch-CCS-16', 'Ch-CCS-21'],\n",
-      "      dtype='object')\n",
-      "Index(['Ch-CCS-22', 'Ch-CCS-23', 'Ch-CCS-27', 'Ch-CCS-29', 'Ch-CCS-30',\n",
-      "       'Ch-CCS-32', 'C-CCS-17', 'C-CCS-19', 'C-CCS-24', 'C-CCS-25'],\n",
-      "      dtype='object')\n",
-      "Index(['No-CCS-1', 'No-CCS-3', 'No-CCS-6', 'No-CCS-9', 'No-CCS-11',\n",
-      "       'No-CCS-12', 'No-CCS-13', 'No-CCS-18', 'No-CCS-20', 'No-CCS-31'],\n",
-      "      dtype='object')\n",
-      "Index(['20.4', '21.4', '22.4', '23.4', '24.4', '26.4', '28.4', '4.4', '6.4',\n",
-      "       'S10'],\n",
-      "      dtype='object')\n"
-     ]
-    }
-   ],
-   "source": [
-    "for key in protein_dict:\n",
-    "    print(protein_dict[key].var_names)"
-   ]
-  },
   {
    "cell_type": "code",
    "execution_count": 38,