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Dev sync main #106

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merged 5 commits into from
Sep 19, 2024
Merged

Dev sync main #106

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dfc7176
release sync (#100)
YaphetKG Apr 18, 2024
a5fce45
Merge branch 'main' into dev-sync-main
YaphetKG Sep 19, 2024
77c21d4
remove jenkins file
YaphetKG Sep 19, 2024
db96446
bump apache version
YaphetKG Sep 19, 2024
02a071b
revert airflow version
YaphetKG Sep 19, 2024
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2 changes: 1 addition & 1 deletion Dockerfile
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Expand Up @@ -2,7 +2,7 @@ FROM apache/airflow:2.7.2-python3.11

USER root
RUN apt-get update && \
apt-get install -y git nano vim
apt-get install -y git nano vim gcc
COPY requirements.txt requirements.txt
USER airflow
RUN pip install -r requirements.txt
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2 changes: 1 addition & 1 deletion dags/roger/config/config.yaml
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Expand Up @@ -49,7 +49,7 @@ annotation:
sapbert:
classification_url: "https://med-nemo.apps.renci.org/annotate/"
annotator_url: "https://sap-qdrant.apps.renci.org/annotate/"
score_threshold: 0.5
score_threshold: 0.8
bagel:
enabled: false
url: "http://localhost:9099/group_synonyms_openai"
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2 changes: 1 addition & 1 deletion requirements.txt
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Expand Up @@ -6,7 +6,7 @@ jsonpickle
redisgraph-bulk-loader==0.12.3
pytest
PyYAML
git+https://github.com/helxplatform/dug@develop
git+https://github.com/helxplatform/dug@2.13.2
orjson
kg-utils==0.0.6
bmt==1.1.0
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