FIX alpha passed in the PM1 algorithm was positive

hiclib · Jun 10, 2014 · 87285c2 · 87285c2
1 parent 590090c
commit 87285c2
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/pastis/algorithms.py b/pastis/algorithms.py
@@ -267,7 +267,7 @@ def run_pm1(directory):
                     os.path.join(directory,
                                  'counts.txt'),
                     options["chromosomes"],
-                    -1 * options["alpha"],
+                    options["alpha"],
                     options["beta"],
                     os.path.join(directory,
                                  'PM1.log'))