Skip to content

Commit

Permalink
Merge pull request #2 from hmgu-itg/dev
Browse files Browse the repository at this point in the history
v2.8.7
  • Loading branch information
youngchanpark authored Oct 7, 2024
2 parents 0796b82 + a87a827 commit ef518b6
Show file tree
Hide file tree
Showing 30 changed files with 1,214 additions and 266 deletions.
37 changes: 37 additions & 0 deletions 502.html
Original file line number Diff line number Diff line change
@@ -0,0 +1,37 @@
<!DOCTYPE html>
<html lang="en">

<head>
<meta charset="UTF-8">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>Helmholtz Munich Imputation Server - Maintenance</title>
<style>
body {
font-family: Arial, sans-serif;
background-color: #f4f4f4;
color: #333;
text-align: center;
padding: 50px;
}

h1 {
color: #2c3e50;
}

p {
font-size: 18px;
}
</style>
</head>

<body>
<h1>Helmholtz Munich Imputation Server Is Currently Under Maintenance</h1>
<p>
We are currently performing maintenance. We should be back shortly.<br>
If you have any questions, you can find our contact detail <a
href="https://imputationserver-doc.readthedocs.io/en/latest/contact/">here</a><br>
Thank you for your patience.
</p>
</body>

</html>
2 changes: 1 addition & 1 deletion pom.xml
Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,7 @@
<modelVersion>4.0.0</modelVersion>
<groupId>cloudgene</groupId>
<artifactId>cloudgene</artifactId>
<version>2.8.5</version>
<version>2.8.7</version>

<name>Cloudgene</name>
<url>http://www.cloudgene.io</url>
Expand Down
17 changes: 17 additions & 0 deletions sample/pages/block.stache
Original file line number Diff line number Diff line change
@@ -0,0 +1,17 @@
<h2>Important Notice Regarding Your Account</h2>
<p>
Dear User,<br>
<br>
Please be advised that your account has been temporarily blocked from using the Genotype Imputation service.<br>
<br>
To request your account to be unblocked, please contact <a href="mailto:[email protected]">[email protected]</a> stating your account username.<br>
<br>
We appreciate your cooperation in this matter and look forward to hearing from you.<br>
<br>
Thank you for your understanding and compliance.<br>
<br>
Sincerely,<br>
<br>
The Imputation Server Team<br>
Helmholtz Munich<br>
</p>
52 changes: 2 additions & 50 deletions sample/pages/contact.stache
Original file line number Diff line number Diff line change
@@ -1,56 +1,8 @@
<h2>Contact</h2>
<br>

<h4>Munich Imputation Server</h4>
<h4>Helmholtz Munich Imputation Server Support</h4>
<ul>
<li><a href="mailto:[email protected]">Dr. William Rayner</a></li>
<li><a href="mailto:[email protected]">Young-Chan Park</a></li>
<li><a href="mailto:[email protected]">Andrei Barysenka</a></li>
<li><a href="mailto:[email protected]">[email protected]</a></li>
</ul>

<br>
<h4>Michigan Imputation Server</h4>
<ul>
<li><a href="mailto:[email protected]">Christian Fuchsberger</a></li>
<li><a href="mailto:[email protected]">Lukas Forer</a></li>
<li><a href="mailto:[email protected]">Sebastian Schoenherr</a></li>
<li><a href="mailto:[email protected]">Sayantan Das</a></li>
<li><a href="mailto:[email protected]">Gonçalo Abecasis</a></li>
</ul>

<br>
<h4>Imputation engine: <a href="http://genome.sph.umich.edu/wiki/Minimac3">Minimac3</a></h4>
<ul>
<li><a href="mailto:[email protected]">Sayantan Das</a></li>
<li><a href="mailto:[email protected]">Christian Fuchsberger</a></li>
<li><a href="mailto:[email protected]">Gonçalo Abecasis</a></li>
</ul>

<br>
<h4>Cloud framework: <a href="http://cloudgene.uibk.ac.at/">Cloudgene</a></h4>
<ul>
<li><a href="mailto:[email protected]">Sebastian Schoenherr</a></li>
<li><a href="mailto:[email protected]">Lukas Forer</a></li>
</ul>

<br>
<h4>Pre-phasing</h4>
<ul>
<li> <a href="https://code.google.com/p/hapi-ur/">HAPI-UR</a>
<ul>
<li><a href="mailto:[email protected]">Amy Williams </a></li>
</ul>
</li>

<li> <a href="https://mathgen.stats.ox.ac.uk/genetics_software/shapeit/shapeit.html">ShapeIT</a>
<ul>
<li><a href="mailto:[email protected]">Jonathan Marchini</a></li>
</ul>

</li>
<li> <a href="https://data.broadinstitute.org/alkesgroup/Eagle/">Eagle</a>
<ul>
<li><a href="mailto:[email protected]">Po-Ru Loh</a></li>
</ul>
</li>
</ul>
55 changes: 2 additions & 53 deletions sample/pages/home.stache
Original file line number Diff line number Diff line change
Expand Up @@ -99,7 +99,7 @@
<div class="container ">


<h2 class="text-center pb-5">The <b><u>easiest</u></b> way to impute genotypes</h2>
<h2 class="text-center pb-5">The easiest way to impute genotypes</h2>

<!-- Workflow Description -->

Expand Down Expand Up @@ -129,7 +129,7 @@

<div class="py-5 bg-light">
<div class="container">
<h2 class="text-center pb-5">Up to date and <b><u>accurate</u></b> reference panels</h2>
<h2 class="text-center pb-5">Up to date and accurate reference panels</h2>
<div class="card-deck text-center">

<div class="card " style="border-top-color: #76c2af; border-top-width: 5px;">
Expand All @@ -153,54 +153,3 @@

</div>
</div>

<!-- Get your own Description -->

<div class="py-5 bg-light">
<div class="container">
<h2 class="text-center pb-5">Build your own Imputation Server</h2>

<div class="card-deck mb-3 text-center ">
<div class="card box-shadow">
<div class="card-body">
<p style="text-align: center">
<img src="/static/images/hosting.png" style="width: 105px;">
</p>
Imputation Server is <b>open source</b> and easy to install on your own <b>Hadoop cluster</b>.
</div>
</div>
<div class="card box-shadow">
<div class="card-body">
<p style="text-align: center">
<img src="/static/images/secure.png" style="width: 105px;">
</p>
Host your own confidential reference panels in a <b>secure</b> and <b>private</b> environment.
</div>
</div>
<div class="card box-shadow">
<div class="card-body">
<p style="text-align: center">
<img src="/static/images/control.png" style="width: 105px;">
</p>
You have <b>full control</b> about the service. <a href="mailto:[email protected]"> Write us</a> to get more information.
</div>
</div>
</div>
</div>
</div>


<div class="py-5 bg-light">
<div class="container">
<h2 class="text-center pb-5">Funded by</h2>
<div class="card box-shadow">
<div class="card-body">
<p style="text-align: center">
<a href="https://www.helmholtz.ai">
<img src="/static/images/helmholtz-ai-logo.png">
</a>
</p>
</div>
</div>
</div>
</div>
56 changes: 56 additions & 0 deletions sample/pages/legal.stache
Original file line number Diff line number Diff line change
@@ -0,0 +1,56 @@
<div class="container" style="padding: 0 0 0 0;">
<div class="row">
<div class="col-10">
<h1>Legal notice</h1>
</div>
<div class="col-2">
<a href="https://imputationserver.helmholtz-munich.de/pdf/Legal_Notice_HMIS.pdf" class="btn btn-danger" role="button">Download PDF</a>
</div>
</div>
</div>

<br>
<h2>Information according to § 5 DDG</h2>

<p>
Helmholtz Zentrum München<br>
Deutsches Forschungszentrum für Gesundheit und Umwelt (GmbH)<br>
Ingolstädter Landstraße 1<br>
85764 Neuherberg
</p>
<p>
Commercial register: HRB 6466<br>
Register Court: Amtsgericht München
</p>

<p>
<b>Represented by the Board of Directors:</b><br>
Prof. Dr. med. Dr. h.c. Matthias H. Tschöp, Dr. Michael Frieser
</p>

<p>
<b>Chairwoman of the Supervisory Board:</b><br>
MinDir’in Prof. Dr. Veronika von Messling
</p><br>

<h2>Contact</h2>
<p>
Phone: +49 89 3187-0<br>
E-mail: info(at)helmholtz-munich.de
</p><br>

<h2>Sales tax identification number</h2>
<p>
Sales tax identification number according to § 27a Umsatzsteuergesetz:<br>
DE 129521671
</p><br>

<h2>Editorial responsibility</h2>
<p>
Institute of Translational Genomics (ITG); Editors: William Rayner, Young-Chan Park
</p><br>

<h2>Consumer dispute resolution</h2>
<p>
We do not participate in dispute resolution proceedings before a consumer arbitration board and are not obliged to do so.
</p>
Loading

0 comments on commit ef518b6

Please sign in to comment.