MARLIN

Methylation- and AI-guided Rapid Leukemia Subtype Inference

Installation

Get the repository: git clone https://github.com/hovestadt/MARLIN

Requirements

R (4.1.3)

R package dependencies: keras (2.13.0) data.table (1.14.2) doParallel (1.0.17) foreach (1.5.2)

Training

Usage (specific CUDA device 1): CUDA_VISIBLE_DEVICES=1 Rscript MARLIN_training.R

Prediction

Usage (specific CUDA device 1): CUDA_VISIBLE_DEVICES=1 Rscript MARLIN_prediction.R